PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10432361g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WOX | ||||||||
Protein Properties | Length: 290aa MW: 32676.9 Da PI: 6.5761 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55 | 1.4e-17 | 17 | 77 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++ ++ql++Le+l++ n p++++++e++++l ++e++V++WFqNr+a+ k+ MA_10432361g0010 17 RQRWAPGQKQLQILERLYADgNGIPNRHKIREITSELsqhgPISESNVYNWFQNRKARAKR 77 89*****************99******************999*****************97 PP | |||||||
2 | Wus_type_Homeobox | 89 | 4.9e-29 | 16 | 79 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW+P ++Q++iLe+ly G Pn+++i++it+eL+++G i++ NV++WFQNrkaR ++kq MA_10432361g0010 16 TRQRWAPGQKQLQILERLYADGNGIPNRHKIREITSELSQHGPISESNVYNWFQNRKARAKRKQ 79 689***********************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.58E-15 | 10 | 81 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 13.491 | 13 | 78 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 2.3E-13 | 15 | 81 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 6.3E-10 | 15 | 82 | IPR001356 | Homeobox domain |
CDD | cd00086 | 5.41E-9 | 17 | 79 | No hit | No description |
Pfam | PF00046 | 2.9E-15 | 17 | 77 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence Send to blast |
MLYDQPVTGP GCRPSTRQRW APGQKQLQIL ERLYADGNGI PNRHKIREIT SELSQHGPIS 60 ESNVYNWFQN RKARAKRKQQ RLPQKEGESE DNSDGESSRE KKHKIDDEFY KEDAGYSEKN 120 ADACENRHGI FLMGSGQAEA RPQIHDRNHD MSNIGLRHVD TDGHVFEKNY GVFNQKTHAN 180 DQQQFDSTRE NVSSSLLCFQ TEADLNSDTL LERTGNAAIV SNENDQQGSR VMTVLVDGKQ 240 VEVSAGVVDV RRTFGGTAEL LDSHGHVVPT NGMGMTFHPL HGSESYTLRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2I4KAM9 | 1e-169 | A0A2I4KAM9_PINPS; WUSCHEL homeobox protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP1873 | 16 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G20700.1 | 8e-21 | WUSCHEL related homeobox 14 |