PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_103341g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 418aa    MW: 48154.9 Da    PI: 8.143
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_103341g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM147.19.1e-46181433128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevlskk 96 
                     pGfrFhPt++elv +yLk+ v+gk +++ ++i+ +d+y ++PwdLp+ ++ +e+e++fF++rd++ ++   r+nr+t+sgyWkatg+d++v +++
  MA_103341g0010  18 PGFRFHPTEQELVGFYLKRMVQGKLHNF-NFIRMLDLYCYDPWDLPSFATLGERELFFFVPRDERCQNnRGRPNRITASGYWKATGSDRSVRENN 111
                     9***********************9888.99***************76777999*********99986377**********************9* PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +glkktLvfy+grap+g+ktdW+m+eyrl
  MA_103341g0010 112 AKCIGLKKTLVFYRGRAPRGQKTDWIMNEYRL 143
                     ******************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-5014161IPR003441NAC domain
PROSITE profilePS5100549.91616161IPR003441NAC domain
PfamPF023651.4E-2418143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MEMNVGQRGF SENLNELPGF RFHPTEQELV GFYLKRMVQG KLHNFNFIRM LDLYCYDPWD  60
LPSFATLGER ELFFFVPRDE RCQNNRGRPN RITASGYWKA TGSDRSVREN NAKCIGLKKT  120
LVFYRGRAPR GQKTDWIMNE YRLPDFDKPK VEVVLCRIYR KATPLKWIEQ KAMSQAEVTS  180
TCEDLDCISQ DSQLSPGKIP KFVDNKRVQE AKTICVRDTD SLACHEITTE PSSSLQDNVT  240
KSDITSSLGW SVESDLNNLM ESTVYGGFVD PVFQVFADEG KKIEGFSSLK AMLNASPSPV  300
ENCWDRLLIS ARAEEPNSVQ IPKLSMDFRN EEVGNRNLQN PWTDLWSPSS IIFRSKYQSS  360
PWISATRRLE TGICRIHGQI YGALPRLYAL LISPRTRLWI AWAMVMADCR ARFWIWDC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-4171616168Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028553434.12e-68NAC domain-containing protein 22-like
TrEMBLA9NVV71e-173A9NVV7_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-67NAC domain containing protein 36