PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oropetium_20150105_18603A | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family | bZIP | ||||||||
Protein Properties | Length: 199aa MW: 21871.4 Da PI: 5.7333 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.3 | 1.8e-09 | 80 | 124 | 7 | 51 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r+ NReA r++R++K a + Lee+v +L a N++L k+l+ Oropetium_20150105_18603A 80 ARKPLGNREAVRKYREKKNAHAAFLEEEVRKLRATNQQLLKRLQG 124 678888***********************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-9 | 71 | 141 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.88E-7 | 78 | 125 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.6E-14 | 80 | 142 | No hit | No description |
CDD | cd14686 | 4.22E-10 | 80 | 132 | No hit | No description |
Pfam | PF07716 | 4.0E-9 | 81 | 123 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MDHAVELPSH LLFSHADITH GLDEFLKTAA TACTHTHSCN PPVPSDTTHT HTCLHAHLQA 60 FTSSENTIVE GGDPSRRRPA RKPLGNREAV RKYREKKNAH AAFLEEEVRK LRATNQQLLK 120 RLQGFAALEA EVVRLRGLLS DVRGKISPEI LDAVDDDFQE RCDVGSDVEC IDPSLCFDNN 180 NAELAAPEES SGPSVVEF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Oropetium_20150105_18603A |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002456496.2 | 3e-65 | basic leucine zipper 23 | ||||
Refseq | XP_021311297.1 | 3e-65 | basic leucine zipper 23 | ||||
TrEMBL | A0A1B6Q6L6 | 7e-64 | A0A1B6Q6L6_SORBI; Uncharacterized protein | ||||
STRING | OS01T0801901-00 | 3e-63 | (Oryza sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3831 | 36 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16770.1 | 9e-29 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Oropetium_20150105_18603A |