PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_15016A
Organism
Oropetium thomaeum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family bZIP
Protein Properties Length: 409aa    MW: 42846.8 Da    PI: 7.4064
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_15016AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.82.8e-09137192156
                                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                                eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kk + + kk++
  Oropetium_20150105_15016A 137 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNESMKKVARTTKKKA 192
                                89*********************************************999999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-5135189No hitNo description
SMARTSM003381.8E-7137200IPR004827Basic-leucine zipper domain
PfamPF001706.8E-8137191IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.531139183IPR004827Basic-leucine zipper domain
CDDcd147021.11E-11142183No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MSDDSDGQRQ CRRGVAVDEL DAAMALADMA GVGPDQQQQQ QQEQPQPPAP AVQQHAQLAP  60
PSQAAAAERE DEELASTRLS LELGKVGIHQ SSPCSSSSSA GHHHHHPVTQ QQQLMPATAA  120
VSGGYGPRPR HMLTEAEKEA KRLRRVLANR ESARQTILRR QAIRDELARK VADLSSQNES  180
MKKVARTTKK KAPTTPVVAM QVVAPTTSQA LEASPPTTPP QPPSFLYTAA PPAVPVPYVW  240
GSWPPTAAAG YDPQLGGSSS PLCLPPCAWY YPAVVADPRT GSAAAAATAT TTFPPFQDAA  300
ARAAAEPTSR DGSPAGAATA EEDTDDDPCS LTLAIDVDKQ RSAPIAIASR GLAAEAMGHP  360
HHNLAVAAEK DSKAATAAEA RKRRKELTKL KHMHGAGRPG GGAGGDQW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1380385RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapOropetium_20150105_15016A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025828038.12e-87uncharacterized protein LOC112903047
TrEMBLA0A3L6F5891e-111A0A3L6F589_MAIZE; Uncharacterized protein
STRINGSi026452m3e-91(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.12e-09bZIP family protein