PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_12532A
Organism
Oropetium thomaeum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family VOZ
Protein Properties Length: 560aa    MW: 62216.5 Da    PI: 5.2692
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_12532AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ422.47.1e-1302604771217
                        VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecega 83 
                                p+p++fl+pkcalwdc+rpa gse++qdycs +ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vgip cega
  Oropetium_20150105_12532A 260 PAPASFLRPKCALWDCPRPAIGSERWQDYCSIYHADLAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGIPICEGA 343
                                89*************************************9879***************************************** PP

                        VOZ  84 atakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfew 167
                                at+kspwna+elfdl ++ege+irewlffdkprraf+sgnrkqrslpdy grgwhesrkqvmk+fgglkrsyymdpqpsss+ew
  Oropetium_20150105_12532A 344 ATSKSPWNAPELFDLYIFEGESIREWLFFDKPRRAFDSGNRKQRSLPDYGGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEW 427
                                ************************************************************************************ PP

                        VOZ 168 hlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                                hlyeyein++da+alyrle+k++d+kksak+k+++++l+++q++++rl+a
  Oropetium_20150105_12532A 428 HLYEYEINDCDAFALYRLEFKSSDAKKSAKSKLACNPLSEIQQQMVRLSA 477
                                ************************************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 560 aa     Download sequence    Send to blast
MGKGPSSRAG SRHHQFRARA KTRVDDLQEM FSGLQSAHKD SRSADAAVLE EQLHQMLREW  60
RAELSAPSPA SSLQGNNREL SDPPSETLRL LQLAAAKEEE DDATSKLVDQ QQQQQPVPAP  120
ANQGQRHVQG GQDMKKEPGE EVVSVAMAQQ QPPLGQGVLV NGGVIPVATA AAAVFHDQMY  180
YVNQELTVED FLYDDDYKIN LTGSNPDVLN NLEGIGQLEY PQFNLPQELP PNMYLDMGNC  240
GQSAGDAFLH MSDLLTTMNP APASFLRPKC ALWDCPRPAI GSERWQDYCS IYHADLAVKE  300
EGPPGTMPVI RPRGIDLKDG PLFAALSAKI QGKHVGIPIC EGAATSKSPW NAPELFDLYI  360
FEGESIREWL FFDKPRRAFD SGNRKQRSLP DYGGRGWHES RKQVMKDFGG LKRSYYMDPQ  420
PSSSYEWHLY EYEINDCDAF ALYRLEFKSS DAKKSAKSKL ACNPLSEIQQ QMVRLSADSP  480
VDTKRPSRNR IKGNPNDVAA NIYSVPNTAV QANVPNAYQA VPQVDQMQFL NGNVVYGPHL  540
PYGYSAERSD FYWNSNDGT*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapOropetium_20150105_12532A
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025818470.10.0transcription factor VOZ1-like
SwissprotQ9SGQ01e-149VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A3L6SN530.0A0A3L6SN53_PANMI; Transcription factor VOZ1
STRINGSi000864m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23433888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-136vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]