PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100185870181 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ERF | ||||||||
Protein Properties | Length: 128aa MW: 13885.5 Da PI: 6.2421 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.1 | 1.4e-15 | 13 | 62 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr++k +g+Wv+eIr+p g + +r +lg++ ++ Aa a++ a +l+g Ote100185870181|100185870181 13 KYSGVRRRK-WGKWVSEIRVP---G-TsQRLWLGSYANPQAAAVAHDVATYCLRG 62 8*****998.**********8...3.34*********************999997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.50E-22 | 13 | 72 | No hit | No description |
PROSITE profile | PS51032 | 20.007 | 13 | 72 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.7E-9 | 13 | 62 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.5E-24 | 13 | 78 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.3E-24 | 13 | 72 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.96E-16 | 13 | 72 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 9.0E-7 | 14 | 25 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.0E-7 | 36 | 52 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence Send to blast |
MSMTSSEMEA HNKYSGVRRR KWGKWVSEIR VPGTSQRLWL GSYANPQAAA VAHDVATYCL 60 RGDSSTHKLN FQLVLPAGAR FGLSPTSVQK VASDAGLAID AQLSRIAGDQ PSDNGDDECL 120 DISVEDYV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00158 | DAP | Transfer from AT1G22810 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012854922.1 | 2e-55 | PREDICTED: ethylene-responsive transcription factor ERF020 | ||||
Swissprot | O80542 | 1e-34 | ERF19_ARATH; Ethylene-responsive transcription factor ERF019 | ||||
TrEMBL | A0A022Q295 | 5e-54 | A0A022Q295_ERYGU; Uncharacterized protein | ||||
STRING | Migut.C01360.1.p | 9e-55 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9494 | 20 | 28 |
Publications ? help Back to Top | |||
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