PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100131750001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | EIL | ||||||||
Protein Properties | Length: 606aa MW: 68998.4 Da PI: 5.8361 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 505.5 | 2.5e-154 | 51 | 433 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekg 81 +el++r w+ +m+lkr ke++k a+k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekg Ote100131750001|100131750001 51 DELERRIWRAKMRLKRYKEMNKXXXXXXXXXXXAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKG 131 79**********************9999999************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS- CS EIN3 82 kpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrf 162 kpv+gasd+Lr+WWk+kv+fdrngpaaiskyq +n+i+++++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrf Ote100131750001|100131750001 132 KPVSGASDNLREWWKDKVRFDRNGPAAISKYQVENAIPGKNEGSGP-VGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRF 211 ****************************************999966.89******************************** PP -TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHH CS EIN3 163 plekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakes 243 plekgv+pPWWPtGke+ww++lgl+kdq ppykkphdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes Ote100131750001|100131750001 212 PLEKGVPPPWWPTGKEEWWHQLGLQKDQVSPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKES 292 ********************************************************************************* PP HHHHHHHTTTTT-S--XXXX..XX.XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX................... CS EIN3 244 fallsvlnqeekecatvsah..ss.slrkqspkvtlsceqkedvegkkeskikhvqavktta................... 302 +++l+++nqee+++++++++ ++ s + +s + +++++++dve+ ++++ +vq++k ++ Ote100131750001|100131750001 293 ATWLAIINQEEALARELYPDrcPPlSASGGSGTFAMNDSSEYDVEVADDESSFDVQEQKPATlgllnmgmdrfqemlpiqq 373 ********************864456677****************777777799*****999******************* PP ...........XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 303 ...........gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 ++++ rkrk + + + +++++ ++tc+ q+++se +++f+d+ s+++++ Ote100131750001|100131750001 374 shgnikdelvtNLDFSRKRK-PANDLNGMMDQK-IYTCEALQCPHSELRHGFHDRASRDNHQ 433 *******************9.555555555555.6*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.4E-128 | 51 | 303 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.8E-75 | 179 | 313 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 3.4E-62 | 182 | 306 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001666 | Biological Process | response to hypoxia | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 606 aa Download sequence Send to blast |
MMMFEDMGFC GDLDFFSSAP IKEADVCPVQ SSEPEPVVED DYTDEEEMDV DELERRIWRA 60 KMRLKRYKEM NKXXXXXXXX XXXAAKQRQS QEQARRKKMS RAQDGILKYM LKMMEVCKAQ 120 GFVYGIIPEK GKPVSGASDN LREWWKDKVR FDRNGPAAIS KYQVENAIPG KNEGSGPVGP 180 TPHTLQELQD TTLGSLLSAL MQHCDPPQRR FPLEKGVPPP WWPTGKEEWW HQLGLQKDQV 240 SPPYKKPHDL KKAWKVGVLT AVIKHMSPDI AKIRKLVRQS KCLQDKMTAK ESATWLAIIN 300 QEEALARELY PDRCPPLSAS GGSGTFAMND SSEYDVEVAD DESSFDVQEQ KPATLGLLNM 360 GMDRFQEMLP IQQSHGNIKD ELVTNLDFSR KRKPANDLNG MMDQKIYTCE ALQCPHSELR 420 HGFHDRASRD NHQLSCSYKH SSQFAVSSFN INDIKPVIFP QSFVQKPNQT PAPPFDLSGL 480 GVPEDGQRMI NELMSCYDNN VVGSKNSXXX XXXXXXXXXX YLQNQGIVLE SGLFDXXXXX 540 XXXXXXPIFG QGDRFDQCKV LNSAFNPNPA ENFNLMFSSP FNVDYTDHFG QARDNNLAKQ 600 DVAMWY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-81 | 181 | 312 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-81 | 181 | 312 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00367 | DAP | Transfer from AT3G20770 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011080514.1 | 0.0 | protein ETHYLENE INSENSITIVE 3 | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A4D9BMJ0 | 0.0 | A0A4D9BMJ0_SALSN; Ethylene-insensitive protein 3 | ||||
STRING | XP_009801714.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |