PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100092010001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 267aa MW: 30963.2 Da PI: 8.6858 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.9 | 9.4e-54 | 9 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrFhPtdeel+v+yL+++++++++++ ++i+evdiyk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra+ sg Ote100092010001|100092010001 9 LPPGFRFHPTDEELIVFYLRNQANSRTCPV-SIIPEVDIYKFDPWELPEKAAFGESEWYFFSPRDRKYPNGARPNRAAVSG 88 79****************************.89***************9888999************************** PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 yWkatg+dk ++s +++ vg+kk Lvfykg+ pkg+ktdW+mheyrl Ote100092010001|100092010001 89 YWKATGTDKVIYS-RSKFVGVKKALVFYKGKPPKGVKTDWIMHEYRL 134 *************.999****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.68E-66 | 5 | 161 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.503 | 9 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-26 | 10 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009825 | Biological Process | multidimensional cell growth | ||||
GO:0009835 | Biological Process | fruit ripening | ||||
GO:0009908 | Biological Process | flower development | ||||
GO:0010150 | Biological Process | leaf senescence | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence Send to blast |
MIGTYNTDLP PGFRFHPTDE ELIVFYLRNQ ANSRTCPVSI IPEVDIYKFD PWELPEKAAF 60 GESEWYFFSP RDRKYPNGAR PNRAAVSGYW KATGTDKVIY SRSKFVGVKK ALVFYKGKPP 120 KGVKTDWIMH EYRLNESRPH SSKENGSMRL DDWVLCRIYK KKNPTKSPEQ RVEDSILQPV 180 IANEVIEPQT QKFPRACSLT HLWELEYMTS ISQLLGENAH VTFNNQEPTV QYGAEKYEPM 240 QVHAPYTDAM KVQVNQTIFM NPVSQLQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-74 | 9 | 163 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-74 | 9 | 163 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-74 | 9 | 163 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-74 | 9 | 163 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-74 | 9 | 163 | 20 | 170 | NAC domain-containing protein 19 |
3swm_B | 4e-74 | 9 | 163 | 20 | 170 | NAC domain-containing protein 19 |
3swm_C | 4e-74 | 9 | 163 | 20 | 170 | NAC domain-containing protein 19 |
3swm_D | 4e-74 | 9 | 163 | 20 | 170 | NAC domain-containing protein 19 |
3swp_A | 4e-74 | 9 | 163 | 20 | 170 | NAC domain-containing protein 19 |
3swp_B | 4e-74 | 9 | 163 | 20 | 170 | NAC domain-containing protein 19 |
3swp_C | 4e-74 | 9 | 163 | 20 | 170 | NAC domain-containing protein 19 |
3swp_D | 4e-74 | 9 | 163 | 20 | 170 | NAC domain-containing protein 19 |
4dul_A | 3e-74 | 9 | 163 | 17 | 167 | NAC domain-containing protein 19 |
4dul_B | 3e-74 | 9 | 163 | 17 | 167 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence and reduces fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. {ECO:0000269|PubMed:29760199}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00221 | DAP | Transfer from AT1G69490 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. {ECO:0000269|PubMed:29760199}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011070984.1 | 1e-132 | NAC transcription factor 29 | ||||
Swissprot | K4BWV2 | 1e-116 | NAP1_SOLLC; NAC domain-containing protein 1 | ||||
TrEMBL | A0A2G9FYW3 | 1e-140 | A0A2G9FYW3_9LAMI; Uncharacterized protein | ||||
STRING | Migut.E00078.1.p | 1e-123 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA746 | 24 | 103 |
Publications ? help Back to Top | |||
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