PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100062220101

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

G2-like

Protein Properties

Length: 270aa MW: 29409.9 Da PI: 6.421

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100062220101	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	51	105	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Ote100062220101\|100062220101 51 KQRLRWTHELHERFVTAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 105 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.066	48	108	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	3.1E-32	50	106	IPR009057	Homeodomain-like
SuperFamily	SSF46689	8.24E-18	50	105	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.1E-25	51	106	IPR006447	Myb domain, plants
Pfam	PF00249	3.2E-9	53	104	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MKYVPVFSVP SSNLVCRNPL VQTQLLDCHI DEMDSIGGGN NATGNANLAS KQRLRWTHEL 60 HERFVTAVAQ LGGPDRATPK GVLRVMGVQG LTIYHVKSHL QKYRLAKYLP DSSCDGAKAE 120 KKESGDMFSG LDGSSKVNES IPSQASQFLL LSRPYYETIE NLTELPASGV HEPGTEDIRP 180 ESENKTDPGT PAASSEPPFV DKERNPSKSL SVNDSHEPQT PDSVSHLVSP LLSPNEKLAK 240 RQRGSTDFAC IKPEMVLSHS ILESSSSPSF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-24	51	108	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-24	51	108	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-24	51	108	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-24	51	108	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-24	51	108	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-24	51	108	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-24	51	108	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-24	51	108	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-24	51	108	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-24	51	108	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-24	51	108	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-24	51	108	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
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Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00252	DAP	Transfer from AT2G01060	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020554068.1	1e-104	uncharacterized protein LOC105175200
Swissprot	Q9SJW0	1e-64	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A2G9GE95	1e-103	A0A2G9GE95_9LAMI; Uncharacterized protein
STRING	EOY29060	2e-89	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2796	24	51