PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100019360051
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NAC
Protein Properties Length: 590aa    MW: 66440.7 Da    PI: 4.5859
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100019360051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1645.3e-51151412128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratks 80 
                                   ppGfrFhPtdeelv +yLk+k+  k+++l +v++e+d+yk++P++Lp  +k+k+++++w+fFs+rd+ky++g r+nr t++
  Ote100019360051|100019360051  15 PPGFRFHPTDEELVLYYLKRKICCKRHRL-DVVTETDVYKWDPEELPgmSKLKTGDRQWFFFSPRDRKYPNGARSNRGTRH 94 
                                   9*************************999.99***************64489999************************** PP

                           NAM  81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   gyWkatgkd+ +    +++vg+kktLvfy+grap+ge+tdWvmhey++
  Ote100019360051|100019360051  95 GYWKATGKDRIISY-ASRAVGIKKTLVFYRGRAPNGERTDWVMHEYTI 141
                                   **********9999.999****************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.45E-588164IPR003441NAC domain
PROSITE profilePS5100555.15614164IPR003441NAC domain
PfamPF023651.2E-2615141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 590 aa     Download sequence    Send to blast
MRVDSGFLTS GQRFPPGFRF HPTDEELVLY YLKRKICCKR HRLDVVTETD VYKWDPEELP  60
GMSKLKTGDR QWFFFSPRDR KYPNGARSNR GTRHGYWKAT GKDRIISYAS RAVGIKKTLV  120
FYRGRAPNGE RTDWVMHEYT ISEEELKRCQ NVKEYYALYK VYKKSGPGPK NGEQYGAPFK  180
EEEWDEECEA QHPIELEKPT KQAIETMPVY NTKAVDCPSS LDDLEEIINR IENVPVSVQP  240
PVVSCGYDLD QFVGEDEIQS TLVGHSSADL PLVQSFSQQP CVPSHYDHTE LGTSQLQSRE  300
APESSSAPSV NVQDPNMTEE DFLKDFLEMD DLESDPIIQN HDIQGNNLES LLFDEFDELN  360
DFYEDVSSFL LDPVEPSQVS QPYVNNFDSG VMDPNSSSYF NSLDNTTQNH AMQQQCTYSD  420
GASYEQQMYE PTYSVPTTME ASQGFSAPST SVILLFDQSN RAPGHLQGGP SFRNQNNGFL  480
NHPAGGKENG RGEQDDETES WFSSAAWAFV ESIPTNPASA SEGVLVNRAF KHMSSLNGVR  540
VTDSNINVSA TSRICGKSRI GFLCFSVLGV ICAVLWLLVG TSKRLIGMYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-461416417165NO APICAL MERISTEM PROTEIN
1ut4_B2e-461416417165NO APICAL MERISTEM PROTEIN
1ut7_A2e-461416417165NO APICAL MERISTEM PROTEIN
1ut7_B2e-461416417165NO APICAL MERISTEM PROTEIN
3ulx_A2e-461414115140Stress-induced transcription factor NAC1
4dul_A2e-461416417165NAC domain-containing protein 19
4dul_B2e-461416417165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074131.10.0NAC domain-containing protein 17-like
TrEMBLA0A2G9I6C60.0A0A2G9I6C6_9LAMI; Uncharacterized protein
STRINGMigut.N02932.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32122451