PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100004440122
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NAC
Protein Properties Length: 960aa    MW: 107280 Da    PI: 4.7446
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100004440122genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.92.1e-49341781128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...................kvkaeekewyfFs 62 
                                   l+pGfrFhPtdeelv +yL++kv gk++++ ++++e+d+yk+ePw+L                     ++k+++ ewyfFs
  Ote100004440122|100004440122  34 LAPGFRFHPTDEELVRYYLRRKVCGKPFRF-QAVTEIDVYKSEPWELSGxxxxxxxxxxxxxxlieysSLKTRDLEWYFFS 113
                                   579*************************99.88**************8458999******999998776667888****** PP

                           NAM  63 krdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   + dkky +g+r nrat +gyWkatgkd++v + k+ ++g+kktLvf++grap+g++t+Wvmheyrl
  Ote100004440122|100004440122 114 PVDKKYGNGSRLNRATGKGYWKATGKDRSVRH-KNLTIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 178
                                   ********************************.8899***************************98 PP
2NAM168.71.9e-524185442128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratks 80 
                                    pGfrFhPtdeelv++yL++kv+gk +++ e+i++vd+yk+ePwdLp  +k+k+++ ewyfFs  dkky +g r+nrat++
  Ote100004440122|100004440122 418 GPGFRFHPTDEELVQFYLRRKVSGKAFRF-EAITDVDVYKIEPWDLPyvSKLKTRDLEWYFFSFLDKKYGNGARTNRATEK 497
                                   59*************************99.89***************5447888888************************ PP

                           NAM  81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   gyWk+tgkd++v++ k++ vg+kktLv++ grapkg++++Wvmheyrl
  Ote100004440122|100004440122 498 GYWKTTGKDRAVYH-KKQIVGMKKTLVYHCGRAPKGQRSNWVMHEYRL 544
                                   **************.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-5731201IPR003441NAC domain
PROSITE profilePS5100556.09234201IPR003441NAC domain
PfamPF023652.6E-2736178IPR003441NAC domain
SuperFamilySSF1019418.11E-61412567IPR003441NAC domain
PROSITE profilePS5100556.83417567IPR003441NAC domain
PfamPF023654.5E-27419544IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009819Biological Processdrought recovery
GO:0010150Biological Processleaf senescence
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 960 aa     Download sequence    Send to blast
MEMGQEFVVA AVGSASASGA APPPRMGAPP PTSLAPGFRF HPTDEELVRY YLRRKVCGKP  60
FRFQAVTEID VYKSEPWELS GXXXXXXXXX XXXXXLIEYS SLKTRDLEWY FFSPVDKKYG  120
NGSRLNRATG KGYWKATGKD RSVRHKNLTI GMKKTLVFHS GRAPDGKRTN WVMHEYRLCD  180
SELESAGVLQ DAFVLCRIFQ KSGLGPPNGD RYAPFIEEEW DEDAPLVIPG GDVEDDVANA  240
DDVQEECMDF DQTLSIAPPL VVYPVESHLT PLPCKRERPS GEPEPLPFDP SKRPKHDDLN  300
SSNANGSEDS TTTSQDPSSM MMMTKSEGPF EFPLLETVGS KDNLPSNPLT FDSSNLEKSV  360
PPGYLKFISN LENEILNISM EKETLKIEVM RAQAMINILQ SRSKTGRKKP SRPLSMLGPG  420
FRFHPTDEEL VQFYLRRKVS GKAFRFEAIT DVDVYKIEPW DLPYVSKLKT RDLEWYFFSF  480
LDKKYGNGAR TNRATEKGYW KTTGKDRAVY HKKQIVGMKK TLVYHCGRAP KGQRSNWVMH  540
EYRLVGSDME TAGVAQDAFV VCRIFQKSGS GPKNGEQYGA PFVEEDWDND ELESVPQDDA  600
TEEVDFGDNA CLDSNDLHHL QQMLGSDVPL NTAPPVSFDS TDNSHFGKAM SFGSTQDHLV  660
PADACNCEPK ICYDQNIQNS LASYDVNDTT VKKECFGERN KSGDSDEFNF LLNDPFFDSF  720
NELPTGDEGF IEANDLSNPF ETTTNALDML EEYLDASDDS SFYLASDPEM IFGTDDLVSN  780
QTLLPQADMG NGTEQSVLPM GQLINNNNNF DAAISPENPG LAEYQSGFEY PYIRKTSQML  840
GNIQAPPAFA AEFPSKDAIL RLSSITGSPP RSSSSTVEIR KWKMGKRGGG RENEKLNVVV  900
SFGFSHGDDG SSSLESSVRI VRGTWKTAAA TSSMGWLCFI SLWILVLSLA FRFGTYIRLN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-443357311171NO APICAL MERISTEM PROTEIN
1ut4_B1e-443357311171NO APICAL MERISTEM PROTEIN
1ut7_A1e-443357311171NO APICAL MERISTEM PROTEIN
1ut7_B1e-443357311171NO APICAL MERISTEM PROTEIN
4dul_A1e-443357311171NAC domain-containing protein 19
4dul_B1e-443357311171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00343DAPTransfer from AT3G10500Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101541.10.0NAC domain-containing protein 78 isoform X1
TrEMBLA0A3Q7JIC20.0A0A3Q7JIC2_SOLLC; Uncharacterized protein
STRINGMigut.F01687.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31402448