PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA034828-PA
Common NameOsI_35164
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 359aa    MW: 36839.1 Da    PI: 7.1384
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA034828-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.28.6e-0999147149
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                       eke kr rr   NRe+Ar   +R++a  +eL +kv+ L+++N+++kk +
  BGIOSGA034828-PA  99 EKEAKRLRRVLANRESARQTILRRQAIRDELSRKVADLSSQNETMKKVA 147
                       89*******************************************9854 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.0E-597145No hitNo description
SMARTSM003382.1E-699162IPR004827Basic-leucine zipper domain
PfamPF001702.3E-799146IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.554101145IPR004827Basic-leucine zipper domain
CDDcd147027.02E-12104145No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MALADMAGAA PGQPESPPPP HATQEAAACC AAVAKGEQED EAEMASTRLS LELGKVGIQS  60
SSPCSSSSSA GHPAMQPAAV ATAAPGYGPR PRHMLTEAEK EAKRLRRVLA NRESARQTIL  120
RRQAIRDELS RKVADLSSQN ETMKKVAIRT IKKAAVAEPM DTAPPAQQQA ETASAVAPPT  180
TATPPSTAPQ PSFLYTAAPA GVAPVPYVWG SWPPCGPTGY EHGNPGGAAA AAAAPPPLCL  240
PPCAWYYPVV ADPRVSSPPT STYPQPYQEQ PTSSPGGGTA EEDTDDDPCS LTLAIDVDKR  300
SAPGAGGSAA GAGQHASISD REKATAAAEA RKRRKELTKL KQMHGGGGGS RPGGGGEHW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1330335RKRRKE
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1567645200.0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126190.0CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615785.11e-154uncharacterized protein LOC4349815
TrEMBLB8BJ600.0B8BJ60_ORYSI; Uncharacterized protein
STRINGORGLA11G0032900.11e-159(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.18e-10bZIP family protein