PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA029595-PA
Common NameOsI_31740
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 173aa    MW: 19757.4 Da    PI: 9.7396
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA029595-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.51.2e-1277132358
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                       e +r rr+++NRe+ArrsR RK+ ++ eL+  v  L   N++L +el++    ++ 
  BGIOSGA029595-PA  77 EERRRRRMISNRESARRSRMRKQRQLSELRGQVVHLRDANRRLLDELNQAMRGCSD 132
                       67899******************************************998877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.1E-1575139IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.4E-1075128No hitNo description
PfamPF001705.6E-1076131IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.55377128IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-1179128No hitNo description
PROSITE patternPS0003608297IPR004827Basic-leucine zipper domain
CDDcd147027.86E-1484128No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MLHHHYHGEV ASLHCLSPPS LPFSSHYHSN MITMAPSPFH FPAATCEPIQ ELLPVVAGNR  60
PAGSGSTDDA YQMAAEEERR RRRMISNRES ARRSRMRKQR QLSELRGQVV HLRDANRRLL  120
DELNQAMRGC SDVHCENARL RKERAELQTK LEHLMQAQKN NTSPSSSQPC KNI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19198RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.492010.0panicle| root
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126170.0CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015612405.11e-125basic leucine zipper 8
TrEMBLA0A0E0IL591e-124A0A0E0IL59_ORYNI; Uncharacterized protein
TrEMBLB8BCQ01e-124B8BCQ0_ORYSI; Uncharacterized protein
STRINGONIVA09G14270.11e-125(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38800.14e-10basic leucine-zipper 43