PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | BGIOSGA026248-PA | ||||||||
Common Name | OsI_27076 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 866aa MW: 94365.5 Da PI: 6.4773 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.6 | 7.3e-15 | 114 | 174 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e kr r+ +NRe+A sRqRKk+++eeLe kvk+++a +L +++ + e a+lk+++ BGIOSGA026248-PA 114 EAKRRARLVRNRESAHQSRQRKKQYVEELEGKVKVMQATIADLTARISCVTAENAALKQQL 174 78********************************************************986 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.5E-14 | 112 | 176 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.484 | 114 | 177 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.8E-13 | 114 | 174 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.5E-13 | 116 | 174 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.7E-17 | 116 | 175 | No hit | No description |
CDD | cd14704 | 3.94E-21 | 117 | 168 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 120 | 134 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF52540 | 2.66E-10 | 661 | 829 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 866 aa Download sequence Send to blast |
MAEPDLLAPF ADLPFPPGDD FPDFPTLGDD AFALEDFDLD DLDFDFDVDL FPPDAPPPVT 60 TSSSSSAAGS PEAGTSSAGD GGSKNEESAD SSSPSRSGSD GGGGGSGKDG KDDEAKRRAR 120 LVRNRESAHQ SRQRKKQYVE ELEGKVKVMQ ATIADLTARI SCVTAENAAL KQQLSGTAGA 180 DAAAPPPPMP MYPAVYPLPM PWIHPAYAMR GSQVPLVPIP RLKTQLPAST PEPPAKKARK 240 TKKVAGVSLL GLLFLMMVCG CLVPAVNRMY GAAYTGEGAA IVPSHHGRIL AVEGPQNSVS 300 NGVDPKVPQN GSETLPALLY LPRNGKHVKI NGNLVIKSIV ASEKASSRLS NYGGKGSGNQ 360 EKEETSLAIP GYVAPLEAGE VMDSAKGMNE LMALAPGDGS IYREDDGMLP QWFSEAMSGP 420 MLNSGMCTEV FQFDLSPTTA DANGIVPVYS GSVTNTSQNY TENLPSGPVQ KVKNRRISYS 480 EAIPLRGSIS NDTDHFKAPP KNHSQSHAGR KPVSSVVVSV LADPREESDR DGEGRISSNS 540 LSRIFVVVLI DSVNVFAGWN TPLSARMQIV RWTAPAEGVT DMWVPPTSGP HITLEYRSEE 600 NSGEVQAEIH CRKPRLPHEE LRYVHFPKPE SYSRGECSCN PVRFLCALYL LQRVAESGMG 660 VESICTLDKL YNLDWFTSAA KNECTAAFGL KWMLNQGFMD HHDDIASYFN KKGVSVIFLF 720 RRNTLRRLIS VLANDYDRNA KQLNGTHKSH VHSKEEAEIL AKFKPVLDVS NLIPNIRNAE 780 KYIRDCLDHF NTTRHMILYY EDIVRNRNAL FQVQEFLGVP VRKLVSRQVK IHTSPLPGLV 840 SNWDDVSNKL NGTQYAHFLD GADYVR |
Expression -- UniGene ? help Back to Top | ||||||
---|---|---|---|---|---|---|
UniGene ID | E-value | Expressed in | ||||
Os.100467 | 0.0 | callus| flower| leaf| panicle| root |
Expression -- Microarray ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | ID | E-value | ||||
GEO | 37991521 | 0.0 |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: By dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000305|PubMed:22050533}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | AK121898 | 0.0 | AK121898.1 Oryza sativa Japonica Group cDNA clone:J033105F09, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015647746.1 | 0.0 | bZIP transcription factor 60 | ||||
Swissprot | Q8LIB3 | 0.0 | BZP60_ORYSJ; bZIP transcription factor 60 | ||||
TrEMBL | B8B546 | 0.0 | B8B546_ORYSI; Uncharacterized protein | ||||
STRING | ONIVA07G23980.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11179 | 30 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-64 | bZIP family protein |