PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA025382-PA
Common NameOsI_25346
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 303aa    MW: 32230.3 Da    PI: 9.0435
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA025382-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_178.67.6e-25180242163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv+eL++eN+aL++el++lkk ++ +++e+
  BGIOSGA025382-PA 180 ERELKRERRKQSNRESARRSRLRKQQECEELARKVAELTTENSALRSELDQLKKACEDMEAEN 242
                       89*********************************************************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.0E-839157No hitNo description
Gene3DG3DSA:1.20.5.1706.9E-18179239No hitNo description
PfamPF001703.1E-22180242IPR004827Basic-leucine zipper domain
SMARTSM003383.4E-22180244IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.553182245IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.81E-12183238No hitNo description
CDDcd147021.23E-19185235No hitNo description
PROSITE patternPS000360187202IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MASSSDEQPK PPEPPAAAAA LKPWRRRRGA VPEGKGKGKG AAASPEKGSS GAPSGDDASR  60
SGDSGSEESS DTRDDDTDHK DSSAPKKRKS GNTSAEGEPS QATLVPYAAV ESPYPLKGRS  120
ASKLPVSAPG RAALPNATPN LNIGIDLWNT PPALAVPAGQ GEASPGLALA RRDGVAHLDE  180
RELKRERRKQ SNRESARRSR LRKQQECEEL ARKVAELTTE NSALRSELDQ LKKACEDMEA  240
ENTRLMGDKA QYKGPTVTTT LGMSIDSSKT QHHDDEGQLH KNTNNNSNGN YVGGSHKPEA  300
NSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1196202RRSRLRK
2196203RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.388570.0callus| flower| leaf| panicle| root
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1567657940.0
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2891790.0AK289179.1 Oryza sativa Japonica Group cDNA, clone: J100028J17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015644731.11e-158DNA-binding protein EMBP-1
SwissprotP250327e-54EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLB8B8E40.0B8B8E4_ORYSI; Uncharacterized protein
STRINGONIVA07G05320.11e-160(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-23basic region/leucine zipper transcription factor 16