PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA020507-PA
Common NameOsI_24519
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 292aa    MW: 32961.4 Da    PI: 8.208
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA020507-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.81.2e-45201512128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgk....rknratksgyWkatgkdk 90 
                        pGfrFhPt+eel+ +yLk+ v+gkkl++ ++i++v++y+++P++Lp  ++ +e+ewyfF++rd+k+atg     r++r+t++g+Wkatg+d+
  BGIOSGA020507-PA  20 LPGFRFHPTEEELLEFYLKQVVQGKKLKF-DIIPTVHLYRHDPRELPGLARIGEREWYFFVPRDRKQATGGggggRPSRTTERGFWKATGSDR 111
                       59**************************9.99***************8778899**************7555556****************** PP

               NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ ++   ++l+glkktLv+y+grap+g+ktdWvm+eyrl
  BGIOSGA020507-PA 112 AIRCAadPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL 151
                       ***98777788***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.14E-5217178IPR003441NAC domain
PROSITE profilePS5100552.20319178IPR003441NAC domain
PfamPF023652.1E-2421151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MEQQRSRSTA AGGEVEVEQL PGFRFHPTEE ELLEFYLKQV VQGKKLKFDI IPTVHLYRHD  60
PRELPGLARI GEREWYFFVP RDRKQATGGG GGGRPSRTTE RGFWKATGSD RAIRCAADPK  120
RLIGLKKTLV YYEGRAPRGT KTDWVMNEYR LPDAAAIPDT MQLQMQHDDM VLCKVYRKAV  180
SLKELEQRVA MEELARSTTS SGTHNTGSPL QQDSSSISIS SSSDAMKKEV VGVDEASAAA  240
HELVRPATLS LPQLEVARPQ SGLEWMQEPF LTQLRSPWME TWSPYYASVL NF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-45131789168Stress-induced transcription factor NAC1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.580850.0callus
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126140.0CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.
GenBankCU4067030.0CU406703.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C111K18, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015643570.10.0NAC domain-containing protein 22-like
SwissprotQ10S651e-102NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A0E0HVR40.0A0A0E0HVR4_ORYNI; Uncharacterized protein
TrEMBLA0A0E0Q2U60.0A0A0E0Q2U6_ORYRU; Uncharacterized protein
TrEMBLA2YH560.0A2YH56_ORYSI; Uncharacterized protein
TrEMBLI1Q5F60.0I1Q5F6_ORYGL; Uncharacterized protein
TrEMBLQ5Z7Q40.0Q5Z7Q4_ORYSJ; Os06g0726300 protein
STRINGORUFI06G29930.10.0(Oryza rufipogon)
STRINGOS06T0726300-000.0(Oryza sativa)
STRINGONIVA06G30950.10.0(Oryza nivara)
STRINGORGLA06G0236900.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.17e-79NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]