PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

BGIOSGA020189-PA

Common Name

OsI_20624

Organism

Oryza sativa subsp. indica

Taxonomic ID

39946

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

VOZ

Protein Properties

Length: 669aa MW: 72999.5 Da PI: 5.6659

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
BGIOSGA020189-PA	genome	RIS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	420	3.9e-129	336	553	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 p+ps++lgpkcalwdc rp++gs+++q+yc+ +ha laln+ gl+gt+pv+rp+gidlkdg+lfaalsakvqgk+vgip+cegaat+kspwna BGIOSGA020189-PA 336 PSPSQYLGPKCALWDCGRPVRGSDECQHYCNPYHAGLALNDdGLLGTRPVMRPRGIDLKDGPLFAALSAKVQGKNVGIPVCEGAATTKSPWNA 428 89************************************9799********************************************* PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrl 185 +elfdlsllege++rewlffd+prraf+sgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqpss++ewhl+eye+n++dalalyrl BGIOSGA020189-PA 429 PELFDLSLLEGESLREWLFFDTPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSNYEWHLFEYETNDSDALALYRL 521 ***************************************************************************************** PP VOZ 186 elklvdekksakgkvskdsladlqkklgrlta 217 e+k++d+k+s+k+k+++++l+++q++++rl+a BGIOSGA020189-PA 522 EYKSSDTKRSVKSKLASSPLSEIQQQMVRLSA 553 ****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence Send to blast
MAGDPAAGGD GGRGSSGGKG SSRSSSRHQQ FRNLAKTRVD DLQEMFSGLQ SARKESRSAD 60 AALLEEQVHH MLREWRAELN VPSPASSLQN SQSQGNNREA SDPPSETLRL LQLAGAEEED 120 DATSKLVMPR SPMPMQSSHE GHNLSPVLQG GTMAGGAAEL MVPRSPLQQM PSSHQSHGHG 180 QDGGQNLQGE AVMGSTAATA APHLGQGMQG DCGGMAGVTN AMFHDQGAYR QGYSVSESFL 240 RSTSPQSLTC SMVNLYYIDH ELNIDDFLQD DDYKINLPGS NPDGPNTMQG IGQLEHQQYN 300 LPLDLPPNSF VDANNSAQSS GDVFFHMSDL LTTMCPSPSQ YLGPKCALWD CGRPVRGSDE 360 CQHYCNPYHA GLALNDDGLL GTRPVMRPRG IDLKDGPLFA ALSAKVQGKN VGIPVCEGAA 420 TTKSPWNAPE LFDLSLLEGE SLREWLFFDT PRRAFDSGNR KQRSLPDYNG RGWHESRKQV 480 MKDFGGLKRS YYMDPQPSSN YEWHLFEYET NDSDALALYR LEYKSSDTKR SVKSKLASSP 540 LSEIQQQMVR LSADSPVESK RTARSRAKAN QKDNNSNAYP ALNTPVQVSA SNAHQTMSVN 600 TPDQVNVSNA YQTMPLNTPN QPGPSNAYHA ASQMDQMTFL DGSVVYGPHL PYGYSTERSD 660 FYWNPSDGT

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence Send to blast

MAGDPAAGGD GGRGSSGGKG SSRSSSRHQQ FRNLAKTRVD DLQEMFSGLQ SARKESRSAD  60
AALLEEQVHH MLREWRAELN VPSPASSLQN SQSQGNNREA SDPPSETLRL LQLAGAEEED  120
DATSKLVMPR SPMPMQSSHE GHNLSPVLQG GTMAGGAAEL MVPRSPLQQM PSSHQSHGHG  180
QDGGQNLQGE AVMGSTAATA APHLGQGMQG DCGGMAGVTN AMFHDQGAYR QGYSVSESFL  240
RSTSPQSLTC SMVNLYYIDH ELNIDDFLQD DDYKINLPGS NPDGPNTMQG IGQLEHQQYN  300
LPLDLPPNSF VDANNSAQSS GDVFFHMSDL LTTMCPSPSQ YLGPKCALWD CGRPVRGSDE  360
CQHYCNPYHA GLALNDDGLL GTRPVMRPRG IDLKDGPLFA ALSAKVQGKN VGIPVCEGAA  420
TTKSPWNAPE LFDLSLLEGE SLREWLFFDT PRRAFDSGNR KQRSLPDYNG RGWHESRKQV  480
MKDFGGLKRS YYMDPQPSSN YEWHLFEYET NDSDALALYR LEYKSSDTKR SVKSKLASSP  540
LSEIQQQMVR LSADSPVESK RTARSRAKAN QKDNNSNAYP ALNTPVQVSA SNAHQTMSVN  600
TPDQVNVSNA YQTMPLNTPN QPGPSNAYHA ASQMDQMTFL DGSVVYGPHL PYGYSTERSD  660
FYWNPSDGT

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Os.27201	0.0	callus\| flower\| leaf\| panicle\| root\| seed

Expression -- Microarray ? help Back to Top
Source	ID	E-value
GEO	32979100	0.0

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK069076	0.0	AK069076.1 Oryza sativa Japonica Group cDNA clone:J023004H20, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015640409.1	0.0	transcription factor VOZ1
Swissprot	Q9SGQ0	1e-114	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B8AZZ4	0.0	B8AZZ4_ORYSI; Uncharacterized protein
STRING	OS05T0515700-01	0.0	(Oryza sativa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-111	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]