PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA016530-PA
Common NameOsI_16137
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family EIL
Protein Properties Length: 439aa    MW: 47985.4 Da    PI: 4.6608
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA016530-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3359.75.6e-110443392301
                       XXXXXXXXXXXXXXXXXXXXXX..XXXXX...........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
              EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa..........tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84 
                       +lkkrmwkdqmll++l++r+ ++ + + +           + +++++ ++ ++rrk+m raQDg+L++Mlk+me+cna+GfvYgi++e+g pv
  BGIOSGA016530-PA  44 DLKKRMWKDQMLLMKLEGRSGHEGALAAQGhrvvrgeeaaAAEEEEEPPEARYRRKAMLRAQDGVLRHMLKMMEACNARGFVYGIVDESGVPV 136
                       8******************99977655555667777776555556669999****************************************** PP

                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S- CS
              EIN3  85 egasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGk 177
                       +g+sdsLr+WWk++v+fdr gp+a+s +       +++s   +++ s  h l ++qD+tlgSLLsal+qhc+ppqr+fpl++g++pPWWPtG 
  BGIOSGA016530-PA 137 SGSSDSLRGWWKDDVAFDRVGPTALSGR------GGRGSPA-AAAASFLHGLLDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLPPPWWPTGG 222
                       ***************************9......3444444.56999********************************************** PP

                       -HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXX CS
              EIN3 178 elwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrk 269
                       e+wwg +g ++++qg+ppy+kphdlkkawk+s+L+avikh+sp++++ir+l++qsk+lq+kmsa++ +++++v+ qee++ ++   +      
  BGIOSGA016530-PA 223 EAWWGLQGeAQASQGPPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQIRKLVWQSKRLQHKMSARDADTWSRVITQEEALSRHALRS------ 309
                       ******************************************************************************976543332...... PP

                       XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXX CS
              EIN3 270 qspkvtlsceqkedvegkkeskikhvqavktt 301
                           + l+++++e +eg   ++ +h+ ++k++
  BGIOSGA016530-PA 310 -LHITPLDDDDDEPNEGPTTRE-SHADKRKRE 339
                       .223334444444444333333.444444443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048736.7E-11644300No hitNo description
Gene3DG3DSA:1.10.3180.101.1E-63173307IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.35E-56178303IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MDDKGKAKAA DAAAATEAAP EQEEKEEEFL SDSESGCESI EIADLKKRMW KDQMLLMKLE  60
GRSGHEGALA AQGHRVVRGE EAAAAEEEEE PPEARYRRKA MLRAQDGVLR HMLKMMEACN  120
ARGFVYGIVD ESGVPVSGSS DSLRGWWKDD VAFDRVGPTA LSGRGGRGSP AAAAASFLHG  180
LLDIQDSTLG SLLSALIQHC EPPQRSFPLD RGLPPPWWPT GGEAWWGLQG EAQASQGPPP  240
YRKPHDLKKA WKISLLSAVI KHLSPRFDQI RKLVWQSKRL QHKMSARDAD TWSRVITQEE  300
ALSRHALRSL HITPLDDDDD EPNEGPTTRE SHADKRKREV GGGEEMQLSL PVDIDVVPEA  360
DRSSIDELMK LYYSCLQGTD TDGGGEQGKD GAGGDGSVAP ETVHVDDADM LEGLLGVAQV  420
VDMSDFPDSP IWHWGSSSD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-491793044128Protein ETHYLENE INSENSITIVE 3
4zds_B2e-491793044128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCR8551640.0CR855164.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: H0523F07, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015635387.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ52e-90EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA2XU630.0A2XU63_ORYSI; Uncharacterized protein
STRINGOGLUM04G14540.10.0(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.19e-87EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]