PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA007886-PA
Common NameOsI_06553
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 276aa    MW: 28631.3 Da    PI: 6.4055
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA007886-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.7e-11149195551
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                       kr +r   NR +A+rsR RK+++i eLe+ v +L+ e +aL  ++  
  BGIOSGA007886-PA 149 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAF 195
                       899**********************************9999877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-13145209IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.611147203IPR004827Basic-leucine zipper domain
PfamPF001707.6E-10149199IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.0E-14149203No hitNo description
SuperFamilySSF579591.2E-11149203No hitNo description
CDDcd147037.42E-21150200No hitNo description
PROSITE patternPS000360152167IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MAQLPPRAPS AAAAAAAAAG QEWSAMAAAG EFLGFAAARR GAHRRSASDS AAFLMEAAVP  60
MDDVIVGVGG GGEFDRLDDE QLMSMFSDVE APAVSDGGGG GGERGPAGEA HLMDMGDGDD  120
GMGATSPAGA GAMAAAAAAA AADGIADPKR VKRILANRQS AQRSRVRKLQ YISELERSVT  180
TLQMEVSALS PRVAFLDHQR SLLTVGNSHL KQRIAALAQD KIFKDAHQEA LKKEIERLRQ  240
VYHQQQIKAT GGADIATAAS MQAKHELLAC EGAAMR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.590881e-158leaf| panicle| root| stem
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots and shoots. {ECO:0000269|PubMed:18065552}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By white light. {ECO:0000269|PubMed:18065552}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126100.0CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015622790.11e-138basic leucine zipper 19
SwissprotQ6K3R91e-139BZP19_ORYSJ; Basic leucine zipper 19
TrEMBLA2X2Y20.0A2X2Y2_ORYSI; Uncharacterized protein
STRINGOBART02G10550.11e-142(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.13e-57bZIP family protein