PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | BGIOSGA007726-PA | ||||||||
Common Name | OsI_06223 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 448aa MW: 47560.5 Da PI: 9.5765 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.9 | 3.3e-11 | 130 | 168 | 3 | 41 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 + k rr+++NReAAr+sR+RKka+i++Le+ L++ BGIOSGA007726-PA 130 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRIRLSQL 168 67999*************************865555554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.9E-8 | 127 | 172 | No hit | No description |
SMART | SM00338 | 2.9E-8 | 128 | 191 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.036 | 130 | 175 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-8 | 131 | 170 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.19E-7 | 132 | 175 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 135 | 150 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.2E-28 | 217 | 300 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 448 aa Download sequence Send to blast |
MAELDHIFLY LNSQDQASAA IQEQPQTLNI FPSQPMHAGE PSPKGSSSMA AINSAPSNNA 60 LAIAAGSSKR PAAAGGQPSR LNNPADQPSA SGKDGKAAVV KKEGGGGGGK HHGGASSAAA 120 SEHEGPKTPD AKTLRRLAQN REAARKSRLR KKAYIQNLET SRIRLSQLEQ ELVQRSRTQG 180 AILGGGAFSA GIGGQSPEAA WFDGEYARWV ESHERMMAHM RAAVEEQPQH GGVAAAAAEA 240 QLRQLVDAAV AHHGVLVELK AAVASADVFH LVSGTWLPAA ERCFLWIGGF RPSELIKMMA 300 RHAEPLTEQQ AAGVYGVQQS AREREEALDR DLHATHHALS DAVSSDSLLL FPPGTGATAY 360 SDVAMAHLSL AISNLSSLEA FVRQADALRL QTLYKLPQIL TARQSARCFL AIADHSHRLR 420 ALTSLWRLAP APPRPTRPSS SASATHQP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP004184 | 1e-168 | AP004184.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1225_F07. | |||
GenBank | AP014958 | 1e-168 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. | |||
GenBank | CP012610 | 1e-168 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015626936.1 | 0.0 | transcription factor TGAL9-like isoform X2 | ||||
Swissprot | Q0E342 | 0.0 | TGAL9_ORYSJ; Transcription factor TGAL9 | ||||
TrEMBL | B8AJB3 | 0.0 | B8AJB3_ORYSI; Uncharacterized protein | ||||
STRING | ONIVA02G08860.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2732 | 36 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 7e-94 | bZIP family protein |
Publications ? help Back to Top | |||
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