PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | BGIOSGA002286-PA | ||||||||
Common Name | OsI_00600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 194aa MW: 20661.7 Da PI: 9.9597 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.7 | 2.2e-12 | 111 | 170 | 2 | 61 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ke r +r+ +NR++A+ R+RKka++ eLe k+k Le N +L +++++l++e +l++ BGIOSGA002286-PA 111 KEQNRLKRLLRNRVSAQQARERKKAYMTELEAKAKDLELRNAELEQRVSTLQNENNTLRQ 170 78899*************************************************999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.7E-13 | 110 | 174 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.6E-11 | 111 | 170 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.84 | 112 | 171 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14704 | 1.24E-16 | 115 | 165 | No hit | No description |
SuperFamily | SSF57959 | 2.94E-12 | 115 | 171 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.9E-17 | 115 | 171 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 117 | 132 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MAAQEQEQEK QQAKTSTTSS LPSSSERSSS SAPNNLKEGG GGVESDEEIR RVPEMGGGGG 60 SASSGAGADE RQGKEDGKQQ GGGGGGGGAA AGGGQEHAPP ARKRGRSAGD KEQNRLKRLL 120 RNRVSAQQAR ERKKAYMTEL EAKAKDLELR NAELEQRVST LQNENNTLRQ MCFYSLPIEA 180 LQTKRKPFLG LTGY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012609 | 0.0 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. | |||
GenBank | CT834891 | 0.0 | CT834891.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106L05, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015617496.1 | 9e-60 | transcription factor HY5 | ||||
Swissprot | Q9SM50 | 5e-40 | HY5_SOLLC; Transcription factor HY5 | ||||
TrEMBL | A2WL89 | 1e-134 | A2WL89_ORYSI; Uncharacterized protein | ||||
STRING | ONIVA01G05400.1 | 1e-112 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1408 | 38 | 111 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11260.1 | 2e-31 | bZIP family protein |
Publications ? help Back to Top | |||
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