PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA002137-PA
Common NameOsI_00868
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 330aa    MW: 36270.5 Da    PI: 10.7655
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA002137-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.29.8e-101952321350
                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                       NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  BGIOSGA002137-PA 195 NRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 232
                       *****************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-6185247IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.45E-9192238No hitNo description
CDDcd147031.30E-18193238No hitNo description
PfamPF001706.8E-8194237IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.6E-12195241No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MAQLPPKIPT MATAWPEFGG GHHHHAAHGH HHQRSPSMGA FLAAPLPPFP LPPPAPANGG  60
AQQQQQQQQH QPSWVDEFLD FSATKRGAHR RSVSDSVAFL DPVSDDNAGV GAHDFDRLDD  120
DQLMSMFSDD LQPPPPQQQP AAPAASASSP SDHNSMNDEK QDRARQMRRR ASATAPRPGS  180
RPPPPPSIPS AILANRQSAQ RSRVRKLQYI SELERSVTSL QTEVSALSPR VAFLDHQRSL  240
LTLGNSHLKQ RIAALAQDKI FKDAHQEALK KEIERLRQIY HQQSLKNAES QPADAGPGPR  300
PRQSRPDRQR GGRRGRAMPA LVIGRDPDAL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.333360.0flower
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329861530.0
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, shoots and panicles. {ECO:0000269|PubMed:18065552}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1009440.0AK100944.1 Oryza sativa Japonica Group cDNA clone:J023138F18, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015635844.11e-135basic leucine zipper 2
SwissprotQ5QNI51e-116BZP02_ORYSJ; Basic leucine zipper 2
TrEMBLB8ACQ70.0B8ACQ7_ORYSI; Uncharacterized protein
STRINGOPUNC01G06850.11e-138(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.18e-53bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]