PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI11G24690.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 1071aa    MW: 121050 Da    PI: 8.2309
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI11G24690.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.56.5e-20926103515127
              NAM   15 vveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktL 106 
                       +v+ L++k+++++  ++ +++ v  y+v+  +L ++ ++  + w++F ++++     +r  r+t sgyWk+ gk   v+s++++ vglkk++
  ORUFI11G24690.1  926 IVHLLRNKLNNQQDGTTCHFPVVASYYVDTCQLTAMGAGAGEPWFYFRHHERWM---HRMDRSTPSGYWKTAGKASFVYSADRHPVGLKKSM 1014
                       4599********9888677**************955555677899999988865...69********************************* PP

              NAM  107 vfykgrapkgektdWvmheyr 127 
                        fy+g +p+g+kt+W ++e+ 
  ORUFI11G24690.1 1015 LFYRGPEPSGRKTKWKIDEFW 1035
                       *******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF525406.23E-26207383IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3001.3E-9215295IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009312.4E-8216290IPR002182NB-ARC
PRINTSPR003647.4E-7236251No hitNo description
PfamPF009318.0E-6296379IPR002182NB-ARC
PRINTSPR003647.4E-7371385No hitNo description
SuperFamilySSF520581.26E-17436807IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.105.2E-11465807IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003647.4E-7658674No hitNo description
PROSITE profilePS5100520.4619121057IPR003441NAC domain
SuperFamilySSF1019417.45E-209261043IPR003441NAC domain
PfamPF023653.3E-89271034IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0043531Molecular FunctionADP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1071 aa     Download sequence    Send to blast
MEAPTCGLWG AVLNLPGRLD GVLLRHGSIL PKGAEEEIPL IKRDLHLMIS ILNGYYSESP  60
ELEDATATTM ARRRCWTKEV CELSYDIEDY IDHYEHAATA GSAGGRTASG GIPPRRKITR  120
RRWQRTTPLW IPERLKQRLW MANKIREFSL RTQDALKRHA MFCSSVGGNG IATSTASSST  180
AATGDASSSS STICWHTTRF RERDFCVPHV GINVAMNKLE DWLTACDDED QKRLRVVSIV  240
GVGGIGKTTL ANELYRKLRR QFECWAFVRS SQKPDVRRIL ISILSQLRLQ QPPESWKCAF  300
PDGTSSSRVL TTTQYDDLAV QSCGYDTKYV FKMKSLSQHD SRYLFFNTVS GSRFIYSPGS  360
TEVSDDIIRK CGSLPLAIDD LVNQWLAEGL ICATKDHTKE EISEACFGEL VSSTMIQPVH  420
TDGNGDVMSF VIQHMVLNFI RYKSIEENFV TVIHHSQTAT KLSDKVRRLS LHFGNVKDAK  480
LPINMRLSQV RTLAFFGAYK YWWRSIKDQF PLLQVLILHF WHDEDIISFD LTIISQLFRL  540
KYLKITSDVT LELQTKTRGL QCLETLKIDA RISTAPLDTT HLSGLLHLSL PADTNLANGI  600
GHMTSLHTFG YFDLSYNSVE NVLSLGKLTN LRNLQLTCST IRLNSLEIKL QCLGFILQKL  660
SNLKSVTMST AGSSCVNSTD ASSANVSVRI SGDGLSSMSS PPALVERLEL LPRICIFSYL  720
PKWISLLSKL RILKIGVREL VRNDIDVLMG LRALTDLSLH VHTKPTEIIF FSGIGFKALK  780
YLKINCCVAW LKLGAMHSLY KLKLGYNVDG VDQERTIADG IQYLHGLKEI SVKIGGADPE  840
KYDRRAEELA FMIDSGLHDR CMSITLQCVR QMFDFNEDKS SLTHEEQRKL KQQEILEDDS  900
GEEYDEIIQD SGEQEVKQST LSEWDIVHLL RNKLNNQQDG TTCHFPVVAS YYVDTCQLTA  960
MGAGAGEPWF YFRHHERWMH RMDRSTPSGY WKTAGKASFV YSADRHPVGL KKSMLFYRGP  1020
EPSGRKTKWK IDEFWALDNA ANGSEELLAQ LCRSRQNVGL MIKGKGPHFH Y
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1356440.0AC135644.2 Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085H07, complete sequence.
GenBankAP0149670.0AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615335.10.0disease resistance protein RGA5-like isoform X1
RefseqXP_015615336.10.0disease resistance protein RGA5-like isoform X1
TrEMBLA0A0E0RC300.0A0A0E0RC30_ORYRU; Uncharacterized protein
STRINGORUFI11G24690.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27511933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-19NAC domain containing protein 90