PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI11G15730.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 806aa    MW: 89981.8 Da    PI: 9.0263
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI11G15730.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.91e-28191442124
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                       +G+ F+Pt+ elvv+yL +++ +++l++ ++i++vdi  ++Pwd+   + ++++  +fF++++++++++ ++n a+ +g+W+  g++ ++++k
  ORUFI11G15730.1  19 SVGCVFRPTEGELVVNYLYRRAMQEPLPC-DFITDVDIQCHNPWDIV-PAGEKKNGKHFFTRKENSHPRDYESNHAAGDGFWRLAGTEVPIYNK 110
                      68***************************.99**************5.455667899************************************* PP

              NAM  96 .....kgelvglkktLvfykgrapkgektdWvmh 124
                           +++lvg+k+tLvf+  +++++e+t Wvm 
  ORUFI11G15730.1 111 psggaDEKLVGMKRTLVFHFRKSSSTERTGWVMP 144
                      999988889**********9999**********6 PP
2NAM64.53.3e-2029741212128
              NAM  12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105
                       elv +yL + + + +l+  ++i+++di++++P d+  + +++++  +fF++++kk++ ++ +n a+  g+W+ tg ++    +++  vg+k+t
  ORUFI11G15730.1 297 GELVINYLYQCAIQMSLPY-DFITDIDILHHNPLDIVPTRQEKKNGKHFFTRKEKKHHGDNCRNHAAGVGFWRGTGIQEFGDGSDKVIVGMKHT 389
                      59****************9.99**************63445667799*********99999999999**********88888889999****** PP

              NAM 106 LvfykgrapkgektdWvmheyrl 128
                      Lvf+  +++ +e+ +W m+e++l
  ORUFI11G15730.1 390 LVFHYRKSSFAESMEWAMQEFQL 412
                      ****999999***********97 PP
3NAM96.63.8e-305316568128
              NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 
                      hPt+ elv +yL +++ + +l+  e+i +v+++ ++Pwd+   +++++ek  yfF++++ k ++++r+nr+t++g+W++ g++k+v+ +  +  
  ORUFI11G15730.1 531 HPTEGELVFHYLYRRAVNMPLPS-EFICDVNVLPHNPWDIVpGALTEREKGKYFFMQKEIKCPSSRRSNRITSKGFWRSAGSEKPVYYNqgG-- 621
                      9********************99.89**************54788889999************************************98551.. PP

              NAM  99 l.....vglkktLvfykgrapkgektdWvmheyrl 128
                            vg+++tL+fy g+++++e+t+W m+e+rl
  ORUFI11G15730.1 622 GsdcmlVGMRRTLTFYFGNSRTAERTKWGMQEFRL 656
                      234566***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-2915148IPR003441NAC domain
PROSITE profilePS5100528.97718213IPR003441NAC domain
PfamPF023657.1E-1420143IPR003441NAC domain
PROSITE profilePS5100520.821286442IPR003441NAC domain
PfamPF023651.8E-9297412IPR003441NAC domain
SuperFamilySSF1019411.96E-22297442IPR003441NAC domain
SuperFamilySSF1019417.72E-34523664IPR003441NAC domain
PROSITE profilePS5100531.209524737IPR003441NAC domain
PfamPF023655.5E-15531656IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 806 aa     Download sequence    Send to blast
MAGPGVCINL LNGTTMHLSV GCVFRPTEGE LVVNYLYRRA MQEPLPCDFI TDVDIQCHNP  60
WDIVPAGEKK NGKHFFTRKE NSHPRDYESN HAAGDGFWRL AGTEVPIYNK PSGGADEKLV  120
GMKRTLVFHF RKSSSTERTG WVMPTCRCQP CALPCDEAGH RCHLYHGCTL IDYMRTVLQK  180
NNGSPSAAHT HAPLVETMVE PDNSWMICRI YKKRQRAPQV IIPPSIGNAR EAVLAVPAIG  240
NAGDRQVTSL TSQGIDVSRR GVMSLPMSSQ RTRAVMVMGR TNRRKKLGLV CVPTHYGELV  300
INYLYQCAIQ MSLPYDFITD IDILHHNPLD IVPTRQEKKN GKHFFTRKEK KHHGDNCRNH  360
AAGVGFWRGT GIQEFGDGSD KVIVGMKHTL VFHYRKSSFA ESMEWAMQEF QLAGSYLLPC  420
FVMRKMMVET NNSWLICPIY KKRQCLLHSI IPHPLVMEGK SSSFFLPLAM HACLIARQFP  480
LLSRRVAVSL SMSRTTSRMV VAIADDMARV VLSTPIVNGA TMHLPAVGMS HPTEGELVFH  540
YLYRRAVNMP LPSEFICDVN VLPHNPWDIV PGALTEREKG KYFFMQKEIK CPSSRRSNRI  600
TSKGFWRSAG SEKPVYYNQG GGSDCMLVGM RRTLTFYFGN SRTAERTKWG MQEFRLAGNG  660
LSPYPAMKHA TGDGSKPPCN CAETTIVKHP LTGNSVTVLQ RNDGLSAVLR NVLAVTPLVE  720
TVVEPDGSWL ICHIYRTRQR ALPVITPPAI ENAREIIIPP ANGNAREAQV RFIDFLQQGS  780
HIESSSPCSC IVGPSLAEGS DESADN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-201665611140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ9401960.0FJ940196.1 Oryza sativa Japonica Group clone KCS246C06 NAM protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615934.11e-104NAC transcription factor 25
TrEMBLA0A0E0R8V30.0A0A0E0R8V3_ORYRU; Uncharacterized protein
STRINGORUFI11G15730.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44822369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-26NAC domain containing protein 83