PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI11G03430.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 352aa    MW: 36561.8 Da    PI: 7.8482
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI11G03430.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.71.2e-08124171148
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kk 
  ORUFI11G03430.1 124 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNETMKKV 171
                      89*******************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-5122170No hitNo description
PfamPF001701.9E-7124171IPR004827Basic-leucine zipper domain
SMARTSM003385.5E-7124187IPR004827Basic-leucine zipper domain
CDDcd147022.85E-11129170No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MSDHSSSDGQ RQCRRRGVGV DVELDAAMAL ADMAGAAPGQ PEASPPPHAT QEAAAAAVAK  60
GEQEDEAEMA STRLSLELGK VGIQSSPPCS SSSSAGHPAM QPAAAATAAP GYGPRPRHML  120
TEAEKEAKRL RRVLANRESA RQTILRRQAI RDELARKVAD LSSQNETMKK VAIRTIKKAA  180
VAPPTTATPP STAPQPSFLY TAAPAGVAPV PYVWGSWPPC GPTGYEPPPP LCLPPCAWYY  240
PVVADPRVSS PPTSTYPQSY QEQPTSSPGG GTAEEDTDDD PCSLTLAIDV DKRSAPGAGG  300
SAAGAGQHAS ISDREKATAA AEARKRRKEL TKLKQMHGGG GGSRPGGGGE HW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1323328RKRRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1122090.0AC112209.4 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence.
GenBankAK2879050.0AK287905.1 Oryza sativa Japonica Group cDNA, clone: J065211O07, full insert sequence.
GenBankAP0149670.0AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615785.11e-172uncharacterized protein LOC4349815
TrEMBLA0A0E0R4E20.0A0A0E0R4E2_ORYRU; Uncharacterized protein
STRINGORUFI11G03430.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.13e-09bZIP family protein