PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI11G01500.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 745aa MW: 82559.3 Da PI: 6.8459 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.7 | 1.6e-51 | 11 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeel+v+yL +++++ k+++ +i+ev+iyk++PwdLp k+ +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++ls ORUFI11G01500.2 11 LPPGFRFHPTDEELIVHYLMNQAASVKCPV-PIIAEVNIYKCNPWDLPGKALFGENEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKSILS 103 79****************************.88***************8777899**************************************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ ++g+kk Lvfykg+ pkg+ktdW+mheyrl ORUFI11G01500.2 104 TpTSDNIGVKKALVFYKGKPPKGVKTDWIMHEYRL 138 988899***************************98 PP | |||||||
2 | NAM | 163.8 | 6.4e-51 | 405 | 544 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtd e++ +yL +k + +++ i+evd++k+ePwdLp+k+k +ekewyfFs++d ky+tg r+nratk+gyWkatgkd+e+++ ORUFI11G01500.2 405 LPPGFRFHPTDAEVILNYLLEKFINPSFTS-LPIHEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFN 497 79**********************999888.56***************99999****************************************9 PP NAM 95 k.............kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+kktLvfy grapkg+kt+Wvmhe+rl ORUFI11G01500.2 498 LqptsyggssnnknNKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL 544 888999888887766677***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.83E-63 | 7 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.099 | 11 | 172 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.7E-26 | 12 | 138 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.09E-59 | 400 | 571 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.453 | 405 | 571 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-24 | 406 | 544 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 745 aa Download sequence Send to blast |
MPSSGGAMPA LPPGFRFHPT DEELIVHYLM NQAASVKCPV PIIAEVNIYK CNPWDLPGKA 60 LFGENEWYFF SPRDRKYPNG ARPNRAAGSG YWKATGTDKS ILSTPTSDNI GVKKALVFYK 120 GKPPKGVKTD WIMHEYRLTG TSANSTTTTK QRRASSMTMR LDDWVLCRIH KKSNDFNSSD 180 QHDQEPEEST VEQLEDIHDN NSSEQPPAPA DMNNQQSDFQ PMTAMSMSKS CSLTDLLNTI 240 DCAALSQFLL DGSSDAIAEP PAPPSPLIYT TPHPNYQTLN YNINSNSSMP HAFESRLDHH 300 DGYVNNYNVN GLRRKRMMAC SATSFDDGSS SNDFVHAVVK KPQLLPSDSR GSGFGGGYCN 360 QQLSETATGF QFQNGNLLSH PFPLNNHLQM HMVEPVKSEL GSLFLPPGFR FHPTDAEVIL 420 NYLLEKFINP SFTSLPIHEV DLNKCEPWDL PSKAKMGEKE WYFFSHKDMK YPTGMRTNRA 480 TKEGYWKATG KDREIFNLQP TSYGGSSNNK NNKQLVGMKK TLVFYMGRAP KGTKTNWVMH 540 EFRLHANLHN DNPNLRLNPK DEWVVCKVFH KKGDDREAIN KQQAQAAAVD QYSAGTPNNG 600 SSVEAGDDDD DLFQLDSIID PSIYFSNSSA ANILSAPPNM SNSVVAANYG ASTTTTGTAS 660 AGSFQQQPNY CSLINKSISS SNVSSWNNMP PPPPVAEGGV HGIGSSYSLQ HQAAMVKALR 720 DVIRLPNPLG MPQYKLDDAY LWDSS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-69 | 11 | 574 | 13 | 172 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator involved in responses to drought stress and salt stress. Transactivates the stress response genes LEA19 and PM19L. {ECO:0000269|PubMed:19135985}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by salt and cold stresses (PubMed:18813954, PubMed:19135985). Induced by drought stress (PubMed:19135985). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:19135985}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK067922 | 0.0 | AK067922.1 Oryza sativa Japonica Group cDNA clone:J013121J10, full insert sequence. | |||
GenBank | CT829509 | 0.0 | CT829509.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103O19, full insert sequence. | |||
GenBank | KP033191 | 0.0 | KP033191.1 Oryza sativa cultivar Dong Jin NAC-related protein 45 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015615093.1 | 0.0 | NAC transcription factor 29 | ||||
Swissprot | Q2RB33 | 0.0 | NAC45_ORYSJ; NAC domain-containing protein 45 | ||||
TrEMBL | A0A0E0R3L9 | 0.0 | A0A0E0R3L9_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI11G01500.1 | 0.0 | (Oryza rufipogon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 4e-78 | NAC-like, activated by AP3/PI |
Publications ? help Back to Top | |||
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