PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ORUFI10G08320.1

Organism

Oryza rufipogon

Taxonomic ID

4529

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 821aa MW: 95535.2 Da PI: 8.8439

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ORUFI10G08320.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	23.2	1.9e-07	20	129	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFsk.rdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 +d e++ +L+++ + ++l+ +++ vd + ++P+d p + w+ + ++ y +++ r++k+gyWk ++ + +++ g+ ORUFI10G08320.1 20 SDTEII-MFLAERKTWDPLPQ-NILVGVDHTMIDPRDSP------GTLWFLNWPdNQLCYDDENNVFRKAKNGYWKCVDA-CRIQT-GTSILGV 103 588998.78888888888888.78999999999999998......3456554440444566788888999****8866.56766.8999* PP NAM 103 kktLvfykgrapkgektdWvmheyrl 128 k L f++g++p g+++ +m ey + ORUFI10G08320.1 104 KLCLEFHEGQTPCGTRSGLMMYEYLI 129 ************************65 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	6.8E-24	5	150	IPR003441	NAC domain
PROSITE profile	PS51005	18.624	11	150	IPR003441	NAC domain
CDD	cd02619	1.78E-33	553	821	No hit	No description
SuperFamily	SSF54001	3.86E-25	554	812	No hit	No description
Gene3D	G3DSA:3.90.70.10	8.9E-23	554	811	No hit	No description
Pfam	PF00112	1.8E-10	611	810	IPR000668	Peptidase C1A, papain C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0006508	Biological Process	proteolysis
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0008234	Molecular Function	cysteine-type peptidase activity

Sequence ? help Back to Top
Protein Sequence Length: 821 aa Download sequence Send to blast
MELFSRVLPP LGIAMGDSWS DTEIIMFLAE RKTWDPLPQN ILVGVDHTMI DPRDSPGTLW 60 FLNWPDNQLC YDDENNVFRK AKNGYWKCVD ACRIQTGTSI LGVKLCLEFH EGQTPCGTRS 120 GLMMYEYLIE QNDELNLPQA YKSLCRMFLQ EDRKIVEDEH ISLNLGVHHN FLGSYSQYLA 180 EIQRQNMVMN SQAVSSDKKS IFIRELDERK SNKCSTKITR SSTRLYRQKI PHIWCLRHSV 240 SRKWFRESMF RVIDKLAKLL ESVLLDLATV RQKINKGKKR IWKMEGKLEK AQIQHLTDFN 300 NKYGPSIRQS VETAEHNNCA LRCLNNYLEL MIEEPRFSSI AYVRLDSQVK KLDKENTSAM 360 DLSSSLHQML QKLNLRVQDE EVWVSQLGSN LQASFRKIMD TSSEIGKLED EVLQLKVDIV 420 EFAPGEVTSC AVYEMIKTLQ IVELFMNNST RHLKLIDGIN SEMREFGSIF NGKVRCLVRF 480 ARYQQTIMEK STQINLFQII NFLGDIRAKV DKMTQMYGLS EVVPIVSNQF IEGSFNADAY 540 AFESLKEHST DLCFSWRTRK FHNRLILPPV RQQTSGTCSY YATLSSVESL YKREYASYPT 600 ILKDKIGQPD EFLVNLSRAQ LEDIVEDFYT RHKVKGSKRL NVCLDKMKNE GVISEESYMN 660 PQAQSTERYK IKQYEELNLE IAMRERDKEE VSIVDKKCIG KKKKRRFRKK MRMKEHIFLT 720 KIKKVIESHI MDGKVLIASF RVTTGYFRLL PHQIYKIPED PQYELNKKGN PCSHCVVVVG 780 FGIRDGECYL IYLNSYGTSW GHDGFGRIYL DSVRKLFLAQ V

Sequence ? help Back to Top

Protein Sequence Length: 821 aa Download sequence Send to blast

MELFSRVLPP LGIAMGDSWS DTEIIMFLAE RKTWDPLPQN ILVGVDHTMI DPRDSPGTLW  60
FLNWPDNQLC YDDENNVFRK AKNGYWKCVD ACRIQTGTSI LGVKLCLEFH EGQTPCGTRS  120
GLMMYEYLIE QNDELNLPQA YKSLCRMFLQ EDRKIVEDEH ISLNLGVHHN FLGSYSQYLA  180
EIQRQNMVMN SQAVSSDKKS IFIRELDERK SNKCSTKITR SSTRLYRQKI PHIWCLRHSV  240
SRKWFRESMF RVIDKLAKLL ESVLLDLATV RQKINKGKKR IWKMEGKLEK AQIQHLTDFN  300
NKYGPSIRQS VETAEHNNCA LRCLNNYLEL MIEEPRFSSI AYVRLDSQVK KLDKENTSAM  360
DLSSSLHQML QKLNLRVQDE EVWVSQLGSN LQASFRKIMD TSSEIGKLED EVLQLKVDIV  420
EFAPGEVTSC AVYEMIKTLQ IVELFMNNST RHLKLIDGIN SEMREFGSIF NGKVRCLVRF  480
ARYQQTIMEK STQINLFQII NFLGDIRAKV DKMTQMYGLS EVVPIVSNQF IEGSFNADAY  540
AFESLKEHST DLCFSWRTRK FHNRLILPPV RQQTSGTCSY YATLSSVESL YKREYASYPT  600
ILKDKIGQPD EFLVNLSRAQ LEDIVEDFYT RHKVKGSKRL NVCLDKMKNE GVISEESYMN  660
PQAQSTERYK IKQYEELNLE IAMRERDKEE VSIVDKKCIG KKKKRRFRKK MRMKEHIFLT  720
KIKKVIESHI MDGKVLIASF RVTTGYFRLL PHQIYKIPED PQYELNKKGN PCSHCVVVVG  780
FGIRDGECYL IYLNSYGTSW GHDGFGRIYL DSVRKLFLAQ V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	700	705	KKKKRR
2	700	708	KKKKRRFRK
3	701	705	KKKRR
4	705	711	RFRKKMR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK064552	0.0	AK064552.1 Oryza sativa Japonica Group cDNA clone:002-112-C01, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015612846.1	0.0	uncharacterized protein LOC4348481 isoform X2
TrEMBL	A0A0E0QYC2	0.0	A0A0E0QYC2_ORYRU; Uncharacterized protein
STRING	ORUFI10G08320.1	0.0	(Oryza rufipogon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP20313	5	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	2e-11	NAC domain containing protein 83