PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI09G19550.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 195aa    MW: 21094.9 Da    PI: 10.8857
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI09G19550.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_157.72.5e-18125178457
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                      ++r rr++kNRe+A rsR+RK+a++ +Le++v++L++eNk+L+ + e+l+k+v+
  ORUFI09G19550.1 125 DRRKRRMIKNRESAARSRARKQARVNNLETEVEQLKQENKMLRVKYEQLRKTVE 178
                      789************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-12122189IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-17124178No hitNo description
PROSITE profilePS5021712.093124178IPR004827Basic-leucine zipper domain
PfamPF001702.5E-16125178IPR004827Basic-leucine zipper domain
CDDcd147075.12E-20126176No hitNo description
SuperFamilySSF579595.44E-13126178No hitNo description
PROSITE patternPS000360129144IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MAMEDDEDMW ANTSSPSASP PRPRGFISTA LSLNSTHLQG LLPSSFVDAA ASPCHASGNN  60
NGGGDGRNAA PMSSIFFASA SYHQQQHHLP APAPLDGAIL PARRFGLDMC AAAAAAPAGV  120
PAAGDRRKRR MIKNRESAAR SRARKQARVN NLETEVEQLK QENKMLRVKY EQLRKTVEVP  180
VPVRRTLQRV LSAPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8359080.0CT835908.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN083I14, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015611345.11e-142uncharacterized protein LOC9271661
TrEMBLA0A0E0QUH61e-140A0A0E0QUH6_ORYRU; Uncharacterized protein
TrEMBLA0A0P0XR341e-140A0A0P0XR34_ORYSJ; Os09g0540800 protein
STRINGORUFI09G19550.11e-141(Oryza rufipogon)
STRINGOS09T0540800-001e-141(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97643044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.24e-09basic region/leucine zipper motif 27