PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ORUFI07G13340.1

Organism

Oryza rufipogon

Taxonomic ID

4529

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 772aa MW: 81764.6 Da PI: 3.8148

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ORUFI07G13340.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	66.1	1e-20	8	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dke 91 lppG+rF+P d+elv++y ++++++l+ vi+e+d + + Pw L +++ + +e +fF++++ k+ +gkr++r + g+W+ + d e ORUFI07G13340.1 8 LPPGVRFDPADDELVSRYX----RKQPIPLHGVIHEADPLGAPPWMLLAAHGRGGDEAFFFAEARAKNVRGKRQKRtVEGGGFWQGQRVciDGE 97 79***********7775....5689999999**********867677888****************5555999665423333 PP NAM 92 vlsk.......kgel......vglkktLvfykgrapkgektdWvmheyrl 128 l+ + + + k +L f+ ++ ++g ++ Wvmhey++ ORUFI07G13340.1 98 RLRVpgdggggE--VggeleiEWRKYMLSFF-AEGERG-SSGWVMHEYAI 143 333356666540..15555647778888999.455554.89*******86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.7E-25	4	162	IPR003441	NAC domain
PROSITE profile	PS51005	25.556	8	162	IPR003441	NAC domain
Pfam	PF02365	8.9E-13	9	142	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence Send to blast
MAAAADGLPP GVRFDPADDE LVSRYXRKQP IPLHGVIHEA DPLGAPPWML LAAHGRGGDE 60 AFFFAEARAK NVRGKRQKRT VEGGGFWQGQ RVCIDGERLR VPGDGGGGEV GGELEIEWRK 120 YMLSFFAEGE RGSSGWVMHE YAITAPADLA SSPIRLYRVR FSGHGKKRKR EPERLGARVH 180 DDDVDGGERA APRRAVAETA LFVQQSSAVD CAESADQSFS GVIEPVFRDL PDMMPEQADA 240 GDTAETTAAV VNLTDAMTEQ PVLPLAADGD DQSSYGVIDP AFRDLADLMV LPPVLAQQEP 300 PLAPVAMVDL PPGNADCADH QSCSGVIDPA FRDLPDMTVL PPEQADTGGG AETTTAMVSL 360 TDKLKYSSSM DGEAAPAWCD FDFPESTDEV LSYMNFTAGA HDNNDGSVGR AAPWRPVSEI 420 AMFEQPSAVD LPPGDADCTE SADQSFSGVI EPVFHDLPDM IREQADAGDT AETTAAVVNQ 480 NYSMALCDFD SGIDFTAGAH DSGMERATPW TPMSEAALFE QQGPPLAPAA VVDLPPGNAD 540 CADHQSSYGD MIVLPSEQAG AGGGAETTEA LFDQPVPPLA ADCANQGSYG VIDPVFRDLA 600 DLIVLPPEQA DAMDGEAAPA WCDFDFPENI DEALSYVDFT AGAHADNDGG VSETAMFEQP 660 GSPPQHDPLL MDADGADQSS SSGALIDTVF GDHAEPIVLP LEQADTGGGA AAAVNLMDKQ 720 KYSSSSMDGE EAPAWCDSDF PESIDEVLSY VDFSTDGASC DFSMDELFDL AD

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence Send to blast

MAAAADGLPP GVRFDPADDE LVSRYXRKQP IPLHGVIHEA DPLGAPPWML LAAHGRGGDE  60
AFFFAEARAK NVRGKRQKRT VEGGGFWQGQ RVCIDGERLR VPGDGGGGEV GGELEIEWRK  120
YMLSFFAEGE RGSSGWVMHE YAITAPADLA SSPIRLYRVR FSGHGKKRKR EPERLGARVH  180
DDDVDGGERA APRRAVAETA LFVQQSSAVD CAESADQSFS GVIEPVFRDL PDMMPEQADA  240
GDTAETTAAV VNLTDAMTEQ PVLPLAADGD DQSSYGVIDP AFRDLADLMV LPPVLAQQEP  300
PLAPVAMVDL PPGNADCADH QSCSGVIDPA FRDLPDMTVL PPEQADTGGG AETTTAMVSL  360
TDKLKYSSSM DGEAAPAWCD FDFPESTDEV LSYMNFTAGA HDNNDGSVGR AAPWRPVSEI  420
AMFEQPSAVD LPPGDADCTE SADQSFSGVI EPVFHDLPDM IREQADAGDT AETTAAVVNQ  480
NYSMALCDFD SGIDFTAGAH DSGMERATPW TPMSEAALFE QQGPPLAPAA VVDLPPGNAD  540
CADHQSSYGD MIVLPSEQAG AGGGAETTEA LFDQPVPPLA ADCANQGSYG VIDPVFRDLA  600
DLIVLPPEQA DAMDGEAAPA WCDFDFPENI DEALSYVDFT AGAHADNDGG VSETAMFEQP  660
GSPPQHDPLL MDADGADQSS SSGALIDTVF GDHAEPIVLP LEQADTGGGA AAAVNLMDKQ  720
KYSSSSMDGE EAPAWCDSDF PESIDEVLSY VDFSTDGASC DFSMDELFDL AD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK101301	0.0	AK101301.1 Oryza sativa Japonica Group cDNA clone:J033033K06, full insert sequence.
GenBank	AP005641	0.0	AP005641.4 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13.
GenBank	AP014963	0.0	AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015646406.1	0.0	uncharacterized protein LOC4343147
TrEMBL	A0A0E0Q7R9	0.0	A0A0E0Q7R9_ORYRU; Uncharacterized protein
STRING	ORUFI07G13340.1	0.0	(Oryza rufipogon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15243	9	14

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	5e-10	NAC domain containing protein 83