PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ORUFI07G06210.1

Organism

Oryza rufipogon

Taxonomic ID

4529

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 664aa MW: 69782.7 Da PI: 3.8513

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ORUFI07G06210.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.6	3.4e-25	9	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk....d 89 lppG++F+P+d+elv ++L ++++gk+l+l+ vi ++d + + Pw+L + +++ +e +fF+ ++ k+ +g+r++r + gyW+ + + ORUFI07G06210.1 9 LPPGLKFEPKDDELVARFLLARIQGKPLPLHGVILDADPLCAPPWRLLAD-HGRGDEAFFFADARAKNGKGSRQKRtVEGGGYWQGQRMcvdgE 101 79**************************99***********743.456789***************555599776544334 PP NAM 90 kevlskkgel.vglkktLvfykgrapkgektdWvmheyrl 128 + v+ +g + + k +L ++ ++ +kg ++ Wvmhey++ ORUFI07G06210.1 102 RLVVPDGGVEiAWRKYVLSYF-ADGEKG-SSGWVMHEYAI 139 555555555515555667777.566665.89******86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.27E-33	4	158	IPR003441	NAC domain
PROSITE profile	PS51005	29.409	9	158	IPR003441	NAC domain
Pfam	PF02365	8.4E-15	10	138	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence Send to blast
MASAAGDGLP PGLKFEPKDD ELVARFLLAR IQGKPLPLHG VILDADPLCA PPWRLLADHG 60 RGDEAFFFAD ARAKNGKGSR QKRTVEGGGY WQGQRMCVDG ERLVVPDGGV EIAWRKYVLS 120 YFADGEKGSS GWVMHEYAIT TPADLASSTM RLYRIRFSGH GKKRKREPES QSAHHDDGRA 180 CCAPQIAMPE TALLEDSAPP PQPVLPPAAV VNSVSDGAVP PPAPVVNCDS DVTDEDELQS 240 FVPEFSARNL FVSLPQGSHE AEADVVGGAL PAQSMSSFAD VGGPENMDDQ SCSGVVFANL 300 SDLIVLPPVE ASGAAPAPSW ASSLDNQNDE APVFFEFPES MDDIVGCFDF ATMDDPSCTS 360 AISEEPFLPP AAMVNHDDGY ASDNADQGCS GAVPLPSAVV DLPNETDGAD QSCSGVVDDS 420 SMVFANIHPL DSPAEGGHEA EAGAGGGRAA PAPSWVSSLD NQNDEAPMFF ELPESLDDMV 480 SCFDFAAMDG QSCTSAVSET ALIEELVLPP AAMVNHHDDS VSDIADHGCS GAVPPPSAVV 540 DLPDDSDGAD QSCSGMVDDS LPGYYEAELK VPLEYAARNP VDSPSKGGHD HEAEVDASGG 600 AGSMMSSPDK EKEHSSSGVM DVEATGFGVP DSMDGLSCID FAETMDDLSC IDFTIDDELF 660 DLWS

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence Send to blast

MASAAGDGLP PGLKFEPKDD ELVARFLLAR IQGKPLPLHG VILDADPLCA PPWRLLADHG  60
RGDEAFFFAD ARAKNGKGSR QKRTVEGGGY WQGQRMCVDG ERLVVPDGGV EIAWRKYVLS  120
YFADGEKGSS GWVMHEYAIT TPADLASSTM RLYRIRFSGH GKKRKREPES QSAHHDDGRA  180
CCAPQIAMPE TALLEDSAPP PQPVLPPAAV VNSVSDGAVP PPAPVVNCDS DVTDEDELQS  240
FVPEFSARNL FVSLPQGSHE AEADVVGGAL PAQSMSSFAD VGGPENMDDQ SCSGVVFANL  300
SDLIVLPPVE ASGAAPAPSW ASSLDNQNDE APVFFEFPES MDDIVGCFDF ATMDDPSCTS  360
AISEEPFLPP AAMVNHDDGY ASDNADQGCS GAVPLPSAVV DLPNETDGAD QSCSGVVDDS  420
SMVFANIHPL DSPAEGGHEA EAGAGGGRAA PAPSWVSSLD NQNDEAPMFF ELPESLDDMV  480
SCFDFAAMDG QSCTSAVSET ALIEELVLPP AAMVNHHDDS VSDIADHGCS GAVPPPSAVV  540
DLPDDSDGAD QSCSGMVDDS LPGYYEAELK VPLEYAARNP VDSPSKGGHD HEAEVDASGG  600
AGSMMSSPDK EKEHSSSGVM DVEATGFGVP DSMDGLSCID FAETMDDLSC IDFTIDDELF  660
DLWS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP003848	0.0	AP003848.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1715_A07.
GenBank	AP004379	0.0	AP004379.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0589E08.
GenBank	AP014963	0.0	AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
GenBank	CP012615	0.0	CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015638590.1	1e-106	uncharacterized protein LOC107275325
TrEMBL	A0A0E0Q592	0.0	A0A0E0Q592_ORYRU; Uncharacterized protein
STRING	ORUFI07G06210.1	0.0	(Oryza rufipogon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP802	22	137

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	8e-15	NAC domain containing protein 83