PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID e_gw1.3.487.1
Organism
Ostreococcus sp. RCC809
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Family bZIP
Protein Properties Length: 448aa    MW: 47958.8 Da    PI: 7.5844
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
e_gw1.3.487.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.81.8e-1180141162
                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                    e+ l+  r +++NRe+A+ sR+RK++++  Le+++ +Le +N +L+  + +l++e  +l+++
  e_gw1.3.487.1  80 ERLLRLSRNRERNRESAQNSRARKREYVRDLEKRARALEMQNGELQAMVMHLTNENHALRMN 141
                    67789999***********************************************9999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.2E-980144IPR004827Basic-leucine zipper domain
PfamPF001702.8E-980142IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.7682145IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.06E-1084140No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-1486142No hitNo description
CDDcd147044.95E-1887136No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006990Biological Processpositive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response
GO:0009408Biological Processresponse to heat
GO:0005635Cellular Componentnuclear envelope
GO:0005654Cellular Componentnucleoplasm
GO:0005783Cellular Componentendoplasmic reticulum
GO:0016020Cellular Componentmembrane
GO:0048471Cellular Componentperinuclear region of cytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MFRACGYFDD DGLGELGELG GGADGAASEA EEESSAAASG KHSRGGGSSS SSSSRGRKRS  60
AGANGESDGG NGKSVESEEE RLLRLSRNRE RNRESAQNSR ARKREYVRDL EKRARALEMQ  120
NGELQAMVMH LTNENHALRM NLQVAGGGAM PTMMMPCVYP PMTPKLPLPP MGAEPAVEAP  180
PSPQLEVKKP TTKRRKQTVA ASVTALALGA LSVAGVTSPG SSPAGAGVSS RSSSRRLLAL  240
SAPPTEDPLV RFGVNVTSLR EEIARNDDER VFALPDAVTT RGLAAWGDKT LDGRAVDVVR  300
PSNVNDPWFS AFKSAGMPEH VNLLSRVSCK EVFKFKGADE GASVAPRMNA DAWPRERRDE  360
DKLERGSQYS NAIPMLSGKE NETSIPEHKD IEGAEESLVS VLLPPPIEGV VQQLSKLFVV  420
TFNKRTTDYT THSCLLPQPV TSANRHL*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00345DAPTransfer from AT3G10800Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001416951.11e-161predicted protein
TrEMBLA4RUF81e-159A4RUF8_OSTLU; Uncharacterized protein
STRINGABO952441e-160(Ostreococcus 'lucimarinus')
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP539288
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17609.33e-06HY5-homolog