PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC12G02230.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 358aa    MW: 38687.4 Da    PI: 4.3149
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC12G02230.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.72.1e-18181451126
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk...kvkaeekewyfFskrdkkyatgk.....rknr.atksgyWk 84 
                      +p G+ F P+ e+l+ +yL++ ++g+++e+ + i +v d+y ++P  L k   ++ ++ k+wyf + ++ k  +g      r nr +   g+W+
  OPUNC12G02230.1  18 VPSGYYFAPKPEQLIRDYLNQWITGRPIEELRGIVRVaDVYGSDPAALTKahkAYGHDGKSWYFLTVAKWKGGRGGagaagRLNRwVEGGGTWH 111
                      589************************99988877666**********8534334447779*****9999988655566669999777799*** PP

              NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmhey 126
                      ++ + + +        g ++ + +   rap  +ktdW+m+e 
  OPUNC12G02230.1 112 NSQRRRVIEG-----YGDRQAFEY---RAPGNKKTDWLMEEI 145
                      9988666654.....899999998...599999*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-2016167IPR003441NAC domain
PROSITE profilePS5100521.73918167IPR003441NAC domain
PfamPF023651.2E-1019144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MAQQDGKKPK EEGPDVTVPS GYYFAPKPEQ LIRDYLNQWI TGRPIEELRG IVRVADVYGS  60
DPAALTKAHK AYGHDGKSWY FLTVAKWKGG RGGAGAAGRL NRWVEGGGTW HNSQRRRVIE  120
GYGDRQAFEY RAPGNKKTDW LMEEIASNLP EATTDDGIMV ICKVYLSPRA KEAPAPELAD  180
EEERQETNVV PGPKRLREPE VTGYDAPPQP DVGCSYSGGG GGETSQATAS MDYYCSTTTH  240
TADDPANAAY YYGDVDAIKP EAYDGDDYGI AINADGKLVL CGYGDGGIGT QGQVPLAMQN  300
INGEMTLFPP MNSYGVDSQV EDDAGLDDFF NDVLVNFDCA GDPNGGGDSH GHSNNDTM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126200.0CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006664975.14e-70PREDICTED: NAC domain-containing protein 76-like, partial
TrEMBLA0A0E0MJF50.0A0A0E0MJF5_ORYPU; Uncharacterized protein
STRINGOPUNC12G02230.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP114741834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.13e-09NAC domain containing protein 64