PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC11G04660.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 314aa    MW: 34073.5 Da    PI: 6.7064
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC11G04660.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.62.5e-19541913128
              NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgk..rknratk..sgyWk.atgkd 89 
                      p f+F+Ptd ++v  yL +++   + + +++++ e d+ ++ePw+L  +v+++  +   fF++ +  +  g+  + +ra+k   g+W+ ++g+ 
  OPUNC11G04660.1  54 PAFKFDPTDADIVASYLLPRALYGRgHAAATAVIEDDVSRCEPWTLM-RVHGHAASAhAFFVHDHPDSGGGRrrKVQRAVKngGGVWRiQKGEV 146
                      78***************9997766636666678899**********7.55555554414555555544433311344554455889*9555664 PP

              NAM  90 kevlsk........kgel..vglkktLvfykgrapkgektdWvmheyrl 128
                       +++          +  l  v  ++ L f+  r+ +++ + Wvmhey++
  OPUNC11G04660.1 147 ATLTIVrdgdgvggD--LdvVYKRRNLSFH--RHGESSTSGWVMHEYEI 191
                      444443445555433..1559999******..5666679********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-2442206IPR003441NAC domain
PROSITE profilePS5100523.50352207IPR003441NAC domain
PfamPF023651.4E-1354191IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MASASRKRSA RSRQEDEQSS SAAAAAAVAE EEEGVAVAGM EAWRFGFSKF SEFPAFKFDP  60
TDADIVASYL LPRALYGRGH AAATAVIEDD VSRCEPWTLM RVHGHAASAH AFFVHDHPDS  120
GGGRRRKVQR AVKNGGGVWR IQKGEVATLT IVRDGDGVGG DLDVVYKRRN LSFHRHGESS  180
TSGWVMHEYE ITSPPLNATV LSRIRATSRA KDKKLGIKEE PSTSAAGDGE RTVPNPDHNA  240
GGDSNHGYYS GDNNYDNGGV VQYYPDQPGP SHQCCYGEQV AGNGFVTGDD GGEPLHLYET  300
FQSPKKMIRT YLIN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1340440.0AC134044.4 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBa0019D06 map S10616A, complete sequence.
GenBankAP0149670.0AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616128.11e-132NAC domain-containing protein 89
TrEMBLA0A0E0MD440.0A0A0E0MD44_ORYPU; Uncharacterized protein
STRINGOPUNC11G04660.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143011926
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.11e-08NAC family protein