PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC10G08540.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 757aa MW: 82446.1 Da PI: 8.786

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC10G08540.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	31.4	5.4e-10	54	132	2	87
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 p G+rF P+d l+ L k +g++ e+ ++++++i++++P +L + +++e +yfFs+ + ++ ++ +r+++ g+Wk OPUNC10G08540.1 54 PHGVRFVPEDLKLL-AILDDKRRGSPSEA--MFHDTQILDFHPAKLYE--DEQEGYIYFFSTIQFRS--KNMVERKAEGGRWKVNN 132 89**********.77***99777..89*********62..23344668888877765..458889899**9654 PP
2	NAM	78.7	1.3e-24	320	453	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lp G+ F Ptd el+ L+ k g++ +++++ +++++i++++P +L k +k eek +yfFs+r+ + ++kr+ ra++ g+W+ +g k OPUNC10G08540.1 320 LPIGYYFVPTDLELL-AILEVKRLGRPlPRAHDAvFHDMRILDFHPAELYeKYAKDEEKgYIYFFSRREFPTLSKKRPLRAAEGGVWHGSGVYK 412 699**********.7799999999953334444**********83455555553559*99999***************** PP NAM 91 evlsk..kgelvglkktLvfykg..rapkgektdWvmheyr 127 +v+sk +g +vg kktLvfy+ +++++kt+W ++e++ OPUNC10G08540.1 413 AVKSKksGGYDVGQKKTLVFYQRftGDKEAVKTNWGIQEFT 453 98777778*******6433667779******96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	6.15E-12	46	148	IPR003441	NAC domain
PROSITE profile	PS51005	9.55	53	194	IPR003441	NAC domain
Pfam	PF02365	1.6E-4	54	150	IPR003441	NAC domain
SuperFamily	SSF101941	1.11E-31	313	472	IPR003441	NAC domain
PROSITE profile	PS51005	30.903	320	473	IPR003441	NAC domain
Pfam	PF02365	3.2E-12	321	453	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence Send to blast
MGWAMVTWAP IESNPTPGER ARRRRRVAQR LLPSGHGGTG RREGNEQARV PAWPHGVRFV 60 PEDLKLLAIL DDKRRGSPSE AMFHDTQILD FHPAKLYEDE QEGYIYFFST IQFRSKNMVE 120 RKAEGGRWKV NNCKTVASPL AITMNFYEHS GDNDPVRKRG EEQPESDDDT ESSMNKRRRV 180 QASAATLAAA VNYQPPLQGG EYYSGYSVFG FGNIGATRSR APPRWRPRTS FVPIPPVGQL 240 SSHLIKRKKK EEKKNRFHFF QIRRAAATRD TSSRLAASSP TVSNLRRLAR PVDRARTAGL 300 GMAAPEDGED KNFGKNKHGL PIGYYFVPTD LELLAILEVK RLGRPLPRAH DAVFHDMRIL 360 DFHPAELYEK YAKDEEKGYI YFFSRREFPT LSKKRPLRAA EGGVWHGSGV YKAVKSKKSG 420 GYDVGQKKTL VFYQRFTGDK EAVKTNWGIQ EFTRIIGPQN EVPDLAVYRL YKIRKVGRET 480 PADLAADAAA ATMSKRRQAS AAAMADQANV ASTSKAYAPP QSSSSQLQQD TPPANAAGPS 540 NLAPRPCNCR ECSAVTICRA PPGAPGHYGY FASSLDRKGK GKAPMDCTEQ AACGCGYAAS 600 TSTTAPPPQG IEYYGFSVAI GDEDDLRLLM EALFPAEEGG AHTVADERDT PQGSSPAVAA 660 AASAPPVLDG VVPGEGNAGD DGRRGSPQGG HGSSTSSAAA TAAGLDVPGG GDDDVSCWSF 720 PWEELLSKDD HDGDDVTSAA RAVDDVSGSQ QEDHPAR

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence Send to blast

MGWAMVTWAP IESNPTPGER ARRRRRVAQR LLPSGHGGTG RREGNEQARV PAWPHGVRFV  60
PEDLKLLAIL DDKRRGSPSE AMFHDTQILD FHPAKLYEDE QEGYIYFFST IQFRSKNMVE  120
RKAEGGRWKV NNCKTVASPL AITMNFYEHS GDNDPVRKRG EEQPESDDDT ESSMNKRRRV  180
QASAATLAAA VNYQPPLQGG EYYSGYSVFG FGNIGATRSR APPRWRPRTS FVPIPPVGQL  240
SSHLIKRKKK EEKKNRFHFF QIRRAAATRD TSSRLAASSP TVSNLRRLAR PVDRARTAGL  300
GMAAPEDGED KNFGKNKHGL PIGYYFVPTD LELLAILEVK RLGRPLPRAH DAVFHDMRIL  360
DFHPAELYEK YAKDEEKGYI YFFSRREFPT LSKKRPLRAA EGGVWHGSGV YKAVKSKKSG  420
GYDVGQKKTL VFYQRFTGDK EAVKTNWGIQ EFTRIIGPQN EVPDLAVYRL YKIRKVGRET  480
PADLAADAAA ATMSKRRQAS AAAMADQANV ASTSKAYAPP QSSSSQLQQD TPPANAAGPS  540
NLAPRPCNCR ECSAVTICRA PPGAPGHYGY FASSLDRKGK GKAPMDCTEQ AACGCGYAAS  600
TSTTAPPPQG IEYYGFSVAI GDEDDLRLLM EALFPAEEGG AHTVADERDT PQGSSPAVAA  660
AASAPPVLDG VVPGEGNAGD DGRRGSPQGG HGSSTSSAAA TAAGLDVPGG GDDDVSCWSF  720
PWEELLSKDD HDGDDVTSAA RAVDDVSGSQ QEDHPAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	178	RKRGEEQPESDDDTESSMNKRRR
2	175	179	KRRRV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK242158	0.0	AK242158.1 Oryza sativa Japonica Group cDNA, clone: J075155G16, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015614025.1	1e-118	spidroin-2
TrEMBL	A0A0E0M7M8	0.0	A0A0E0M7M8_ORYPU; Uncharacterized protein
STRING	OPUNC10G08540.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP22021	6	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	5e-12	NAC-like, activated by AP3/PI