PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC09G00730.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GeBP
Protein Properties Length: 375aa    MW: 41601.3 Da    PI: 10.6197
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC09G00730.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57344.25.5e-14187277397
           DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                      f+r w+ +De+++L +l d + +  + p++     f++ +++  s++++++++ eK+rrLK+++++ v        ++ +k+hd++  +ls +i
  OPUNC09G00730.1 187 FRRKWNGNDEMMILEALADHTRNGQTVPQEpGHPLFHDLAQHLESSTFNHTDVREKLRRLKRQYNDVVLS-----GTAPTKDHDRQLHKLSCQI 275
                      899*****************988888888845666777777778899********************999.....556799************* PP

           DUF573  96 Wg 97 
                      Wg
  OPUNC09G00730.1 276 WG 277
                      *8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.7E-15187277IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MAPKRSTSSP SGRHSPPPPV APQSPPRPPA RRNLAPALAD PPRAVEGGDS GSGSGNGANS  60
PIKSKKRVTA PPVSHPGPKK SPSSEAPALQ ATPDHHPKSP PKSSMKKKRN KKKEVLRAGD  120
SAASPDGPPE PIQQAVEEDV PPKARKKPEE TEEEVAAQQG GEEGRKSKRV PPDPKRTKIV  180
DAHMSGFRRK WNGNDEMMIL EALADHTRNG QTVPQEPGHP LFHDLAQHLE SSTFNHTDVR  240
EKLRRLKRQY NDVVLSGTAP TKDHDRQLHK LSCQIWGHPG AHAGHNQRSH ARDEQRSFDE  300
MCKQFPLLAK EIEGLVEEQP AIMNLFPRLD GHQVVAIEKK LENLRWIDMK RKKKMAVKMA  360
KIRKALIYKL EELRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104111MKKKRNKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0587572e-88AK058757.1 Oryza sativa Japonica Group cDNA clone:001-001-B04, full insert sequence.
GenBankAP0029702e-88AP002970.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0504D03.
GenBankAP0032132e-88AP003213.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14.
GenBankAP0149572e-88AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015644071.11e-107basic salivary proline-rich protein 2
TrEMBLA0A0E0LYD70.0A0A0E0LYD7_ORYPU; Uncharacterized protein
STRINGOPUNC09G00730.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP17455910
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00250.12e-07DNA-binding storekeeper protein-related transcriptional regulator