PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OPUNC07G15160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 184aa MW: 21037.4 Da PI: 9.8009 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 62 | 1.9e-19 | 20 | 145 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknr.atksgyWkatgkdk 90 p frF +d+el+ L k++g + l+ v+++++i++++P +L + ++ e + +yfFs + k+a+ k+ +r + + g+Wka ++ OPUNC07G15160.1 20 PHNFRFMLEDQELL-VILDDKLHGAPldRALDAVFHDTRILDFHPAKLYgMYTEDEANgYIYFFSMIEFKAAKPKKWSRsVGQGGRWKAVLGSR 112 6779**********.56*********53333456**************8333333444455***********9999999677899***987777 PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyr 127 ++++ +g v k t+ fy kg+ t+W mhe+ OPUNC07G15160.1 113 RMVEVGGVIVSRKLTMEFY----VKGVTTNWGMHEFV 145 77777**************....8999********95 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.45E-25 | 14 | 153 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 20.011 | 19 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.1E-9 | 20 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 184 aa Download sequence Send to blast |
MAALGDGEEK KAGKNKHGFP HNFRFMLEDQ ELLVILDDKL HGAPLDRALD AVFHDTRILD 60 FHPAKLYGMY TEDEANGYIY FFSMIEFKAA KPKKWSRSVG QGGRWKAVLG SRRMVEVGGV 120 IVSRKLTMEF YVKGVTTNWG MHEFVRITAP TRRASLIQRK IIGVLKDFIP IELFFEMAIN 180 PEQS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | AK109904 | 1e-133 | AK109904.1 Oryza sativa Japonica Group cDNA clone:002-149-F12, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015614522.1 | 6e-83 | uncharacterized protein LOC4348616 | ||||
TrEMBL | A0A0E0LLD4 | 1e-134 | A0A0E0LLD4_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC07G15160.1 | 1e-134 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3563 | 23 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33480.1 | 1e-09 | NAC domain containing protein 41 |