PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G11760.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 750aa    MW: 80208.1 Da    PI: 3.813
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G11760.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.83e-2581421128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dke 91 
                      lppG+rF+P d+elv +yL +++++k+l+l+  i+e+d +++ Pw L + +  + +e +fF+ ++ k+ +gkr++r +   g+W+ +    d e
  OPUNC07G11760.1   8 LPPGVRFDPGDDELVARYLLRRLQKKPLPLDGLIHEADPLSAPPWMLLADHGRGGDEAFFFADARAKNVKGKRQKRtVEGGGFWQGQRVcvDGE 101
                      79****************************999**************877777889********************555599**9665422333 PP

              NAM  92 vlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       l+       + e  + k +L f+ ++ ++g ++ Wvmhey++
  OPUNC07G11760.1 102 RLRVpgdgggGLEIEWRKYMLSFF-AEGERG-SSGWVMHEYAV 142
                      333356665333346777788898.455554.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-304161IPR003441NAC domain
PROSITE profilePS5100528.6538161IPR003441NAC domain
PfamPF023653.2E-159141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    Send to blast
MAAGAGGLPP GVRFDPGDDE LVARYLLRRL QKKPLPLDGL IHEADPLSAP PWMLLADHGR  60
GGDEAFFFAD ARAKNVKGKR QKRTVEGGGF WQGQRVCVDG ERLRVPGDGG GGLEIEWRKY  120
MLSFFAEGER GSSGWVMHEY AVTAPADLAS SPIRLYRVRF SGHGKKRKRE PELLGARAHD  180
DDHDGGERVA PLRAVAETAP GDADCAESAD QRQGFSGVID PVYRDLPDMM PEQDDAGDSA  240
ADILFEQAVP PAFRDLADLI VLPPEQADTG GAETTVSAAV VNQNYSMALC DFDFPESIDE  300
MLSDIDFTAG AHDDNERAAP WPPMSETTLF EQQGPPLAPA AMVDLPPCDA ECADHQSSSG  360
VIDPVFRDCA DTIVLPPEQA YAGDSAAVVN LTDVLFEQLG PPPLAADGAN QSSSGVIDPV  420
FGDLADTIVL PPEQDDARGG AENQNYSMGG EEALAWCDFD FPESIDEVLS YIDFPDGGVE  480
RAAPWRPVSE NALFEQPGPP PQHDPLLARA AVVDLHPGDA DGADQSSSGV IDLVFRDHAD  540
LTVLPPEQAD TGGGAETTAA AVNLMDGEVA PAWCDFDFPE SIDENYSMGG EEALAWCDFD  600
FPESIDEVLS YIDFPDGGVE RAAPWRPVSE NALFEQPGPP PQHDPLLARA AVVDLHPGDA  660
DGADQSSSGV IDLVFRDHAD LTVLPPEQAD TGGGAETTAA AVNLMDGEVA PAWCDFDFPE  720
SIDEVLSYID FSTDDTSCDF SMDELFDLAN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1013010.0AK101301.1 Oryza sativa Japonica Group cDNA clone:J033033K06, full insert sequence.
GenBankAP0056410.0AP005641.4 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646406.10.0uncharacterized protein LOC4343147
TrEMBLA0A0E0LK610.0A0A0E0LK61_ORYPU; Uncharacterized protein
STRINGOPUNC07G11760.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15243914
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52890.11e-09NAC domain containing protein 19