PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G09120.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 582aa    MW: 62160.9 Da    PI: 3.8746
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G09120.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.84.4e-23121281128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      lppG++F+Ptd+elv ++L  +++g++l+l+ vi ++d +++ Pw+L ++ +++ +e +fF++++ k+ +g+r++r +   g W+  g+  e+ 
  OPUNC07G09120.1  12 LPPGLKFDPTDDELVARFLLGHLQGEPLPLHGVILDADPLSAPPWKLLAE-HGRGDEGFFFAEARAKNGKGSRQKRtVEGGGLWQ--GQRVEI- 101
                      79****************************99***************744.4567799******************4455889*8..554445. PP

              NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                             + k +L f+ ++ ++g ++ Wvmhey++
  OPUNC07G09120.1 102 ------AWRKYMLSFF-AEGERG-SSGWVMHEYAI 128
                      ......468999****.444454.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.18E-2911147IPR003441NAC domain
PROSITE profilePS5100522.22512147IPR003441NAC domain
PfamPF023652.8E-1413127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    Send to blast
MAAGGGGVGD GLPPGLKFDP TDDELVARFL LGHLQGEPLP LHGVILDADP LSAPPWKLLA  60
EHGRGDEGFF FAEARAKNGK GSRQKRTVEG GGLWQGQRVE IAWRKYMLSF FAEGERGSSG  120
WVMHEYAITS PAELASSPIR LYRVRFSGHG KKRKREPQTD EEGRARAAPQ IAGTDSTLLE  180
EVVPSAAVVE IAADGADHLP DLPAEEAVAG ADAQNYYLSG VMDGEALAVS RRHCPPPSMN  240
SNNETALLDE RVLPPQTPAT TGTGVALLDE VVPPPATVVD DADQGIVMDD SSTVFSHLSD  300
MITLPAEEGD ATGGAALAPT GTTSLDDLYY SLADFEFPQI NMDKLLSCID FSTADPSCLD  360
MEFSMDDLHE PQNTRTEVAL LQELVLPPQP VPVPLATLVE VADSSDCANQ GCSGVMHYSS  420
VVFTHLSDMI VLPEEEEADA TDGAAPALAG TMSLDYQNYS LSDFEERVPV VDVASDADGA  480
DQCSSIHPKV FSHLEDLITL PAEEADQADA CSAAPAPSLD NQNYSSLGVI DSEAPALSDF  540
EFPETIDEVL NSIDFTMADR SCLDMEMEFS MDDLLDFDLP AD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126151e-172CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0LJ850.0A0A0E0LJ85_ORYPU; Uncharacterized protein
STRINGOPUNC07G09120.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.13e-11NAC domain containing protein 86