PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G06070.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 354aa    MW: 37749 Da    PI: 3.8685
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G06070.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.12e-2491401128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dke 91 
                      lppG++F+P+d+elv ++L ++++gk+l+l+ vi ++d ++v Pw+     +++ +e +fF+ ++ k+ +g+r++r +   gyW+ +    d e
  OPUNC07G06070.1   9 LPPGLKFEPKDDELVARFLLARIQGKPLPLHGVILDADPLSVPPWRPLV-DHGRGDEAFFFADARAKNGKGSRQKRtVEGGGYWQGQRMcvDGE 101
                      79****************************99*************9542.3456789*******************555599**9765433222 PP

              NAM  92 vlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                + e+++ k +L ++ g a+   ++ Wvmhey++
  OPUNC07G06070.1 102 R--LlvfdggGVEVTWRKYVLSYFAGGAKG--SSGWVMHEYAI 140
                      2..122445444557788899999888777..89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.67E-294145IPR003441NAC domain
PROSITE profilePS5100525.8629155IPR003441NAC domain
PfamPF023655.0E-1510139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MAAAAGDELP PGLKFEPKDD ELVARFLLAR IQGKPLPLHG VILDADPLSV PPWRPLVDHG  60
RGDEAFFFAD ARAKNGKGSR QKRTVEGGGY WQGQRMCVDG ERLLVFDGGG VEVTWRKYVL  120
SYFAGGAKGS SGWVMHEYAI TAPADLALVA DATLPYPGCS SVVDDSSLVF AALPDLIVLP  180
PEEAGASGRA PSWVSSLDNQ NDEAPMFFEF PESMDDMVGC FDFATTDDQS CTSAVSEIAL  240
LEELVLPPEA MVNHHDDYAY DSADQGCSGS VPPPSAMVDR EADAEAGSGG GVAPAAAQSV  300
TSSPDNQKYS LSGVMDIEGP ESMNDLSCID FAETMDNLSC IDFTIDDELF DLWS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0LI740.0A0A0E0LI74_ORYPU; Uncharacterized protein
STRINGOPUNC07G06070.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.16e-15NAC domain containing protein 86