PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G09210.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 576aa    MW: 61287.5 Da    PI: 4.0968
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G09210.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.53.6e-2591411128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk....d 89 
                      lppG++F+P+d+elv ++L ++v+gk+l+l+ vi ++d +++ Pw+L +  +a+ ++ +fF+ ++ k+ +g+r++r +   gyW+ +      +
  OPUNC05G09210.1   9 LPPGLKFDPKDDELVARFLLARVQGKPLPLDGVILQADPLSAPPWRLLAD-HARGDDAFFFADARAKNGKGSRQKRtVEGGGYWQGQRMcvdgE 101
                      79****************************999**************743.4567899******************555599**9776544323 PP

              NAM  90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k v+      + e  + k +L ++ ++ +kg ++ Wvmhey++
  OPUNC05G09210.1 102 KLVV-PhdggGMEIAWRKYVLSYF-ADGEKG-SSGWVMHEYAI 141
                      3333.2467444456777788888.555565.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.24E-324160IPR003441NAC domain
PROSITE profilePS5100529.1219160IPR003441NAC domain
PfamPF023653.2E-1510140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MAAADGDGLP PGLKFDPKDD ELVARFLLAR VQGKPLPLDG VILQADPLSA PPWRLLADHA  60
RGDDAFFFAD ARAKNGKGSR QKRTVEGGGY WQGQRMCVDG EKLVVPHDGG GMEIAWRKYV  120
LSYFADGEKG SSGWVMHEYA ITAPSELASS PMRLYRIRFS GHGKKRKREP ESQSAHDEHG  180
RARCAPQIAM AETALLEDSA PPPQPVHPPA AVVNSVSDGT NQGFSGAVPP PAPVVHHTND  240
SDITDQYSSL VFSDQPGSID EDELQSFVPE FVAHNLFVSL PEGSREAEAD VGGGASLANK  300
NHSSSGVMEA QVFADVGGPE STDDLSCSGV VDDSSMVFAN LPGLIHDAEL KLLLEYTTRN  360
PLDSLAEGGH EAEAGGGAAP APSWVSSLDN QNDEAPMFFE FPESMDDMVG SFDFAAMHDQ  420
SCTSAVSETA LIEELILPPA AMVNHHDDYA SDSTDQGCSG VVPPPSAVVD DSSMIFDNLP  480
GYYEAEMNLL LEYAAHNPVD YPAKGGHEAE VDASGGAGSM MSSPDKQKEH SSSGVMDVET  540
TGFGVPDSMD GLSCIDFAET TDDLSCIDFT IDDEMF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0043790.0AP004379.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0589E08.
GenBankAP0052570.0AP005257.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0417F02.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0L0R00.0A0A0E0L0R0_ORYPU; Uncharacterized protein
STRINGOPUNC05G09210.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-10NAC domain containing protein 83