PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G36710.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 329aa    MW: 36071 Da    PI: 4.5603
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G36710.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.12.4e-2191581128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk......kvkaeekewyfFskrdkkya..tgkrknra.....tk. 79 
                      l+pG+ F+P+d+ l++ +L++k+++ ++e+e+  i+++d+y+++P +L +       ++++++ wyfF++ + +++  t+ r++ra     t  
  OPUNC03G36710.1   9 LQPGYAFRPSDDHLITLFLRPKISKVPFEFEDWlINHADVYSADPAELVAehrpapGTQGSSSVWYFFCSPRYTSKrrTSGRRRRAigggcTGg 102
                      579***************************9988**************7446676655667789*****9876555225668888755554224 PP

              NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy.......kgrapkgektdWvmheyrl 128
                      +++Wk+ g +k+v+ ++g+ vg  + + +        +g+a++ ++  W+m ey l
  OPUNC03G36710.1 103 ESVWKSEGGKKAVIGADGRRVGYLQKFSYGvyessssSGSARTFTRLGWCMTEYGL 158
                      778********************999999655776666788888899*******76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-313176IPR003441NAC domain
PROSITE profilePS5100528.6719176IPR003441NAC domain
PfamPF023656.8E-1311157IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MAAADEIALQ PGYAFRPSDD HLITLFLRPK ISKVPFEFED WLINHADVYS ADPAELVAEH  60
RPAPGTQGSS SVWYFFCSPR YTSKRRTSGR RRRAIGGGCT GGESVWKSEG GKKAVIGADG  120
RRVGYLQKFS YGVYESSSSS GSARTFTRLG WCMTEYGLDD AIDGADQQVL CKVYRSPRAV  180
CAEARTAAKS ADSSCSGSKR KADDVVNHLE EAPPSARPRQ EVRSEHDGQP ELLPELDLDA  240
LLSAPTDDKL GVEFDTATTE QYMRYLMNDE PLPWAPTMEV VDDGGRGDGD EFIKTANGPC  300
IEEEIIERLA AGQTLDEILG TDHGEQVFD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126110.0CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015629669.11e-169NAC domain-containing protein 71-like
RefseqXP_015629670.11e-169NAC domain-containing protein 71-like
TrEMBLA0A0E0KL060.0A0A0E0KL06_ORYPU; Uncharacterized protein
STRINGOPUNC03G36710.10.0(Oryza punctata)
STRINGOPUNC03G36760.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43632158
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.15e-10NAC domain containing protein 45