PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC03G09580.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 422aa MW: 45833.4 Da PI: 10.1188 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 63.5 | 3.9e-20 | 338 | 400 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae ee +++++ L++eN++Lk+el++l++++ +l+se+ OPUNC03G09580.4 338 ERELKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKQLQEKCNSLTSEN 400 89***********************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 1.4E-25 | 64 | 144 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 7.7E-7 | 183 | 306 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.1E-15 | 333 | 396 | No hit | No description |
Pfam | PF00170 | 8.2E-18 | 338 | 400 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.0E-19 | 338 | 402 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.587 | 340 | 403 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.5E-9 | 341 | 397 | No hit | No description |
CDD | cd14702 | 5.09E-21 | 343 | 394 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 345 | 360 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 422 aa Download sequence Send to blast |
MRHASPRRAP KFPKSKSSPI RGPPPAGASG AASPLAAPRL CWIGAEWRSV RERFSLPPSK 60 DDLNEQSTPT NPPTAYPDWS QFQAYYNPAG TAPMTPPGFF HPNVTPSPQG HPYMWGPQMM 120 PPYGTPPPYA AMYAQGTPYQ QAPMLPGSHP YNPYPGQSPN GTVQTPTSAG GTETDKSSKS 180 KRKTPLKRSK GSLGNLDVVA TKNKKAPAKP SASSSNEVRV EVEVLLKEAA QIPKGSRTKD 240 GSEHGQGNDA SNKGATAQSS AVEPVQASTG PVVLNPMMPY WPVPPPMAGP ATGVNMGMDY 300 WGTPTSVPMH NKVIAAPASA PSSNSRDVVL SDPAIQDERE LKRQKRKQSN RESARRSRLR 360 KQAEWEEVAN RADLLKQENS SLKEELKQLQ EKCNSLTSEN TTLHEKLKEL EGEKSNGNWY 420 KE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 354 | 360 | RRSRLRK |
2 | 354 | 361 | RRSRLRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK066563 | 0.0 | AK066563.1 Oryza sativa Japonica Group cDNA clone:J013071G08, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015632857.1 | 0.0 | bZIP transcription factor 16 isoform X1 | ||||
Refseq | XP_015632859.1 | 0.0 | bZIP transcription factor 16 isoform X1 | ||||
Refseq | XP_015632860.1 | 0.0 | bZIP transcription factor 16 isoform X1 | ||||
Refseq | XP_015632861.1 | 0.0 | bZIP transcription factor 16 isoform X1 | ||||
Refseq | XP_025879940.1 | 0.0 | bZIP transcription factor 16 isoform X1 | ||||
Refseq | XP_025879941.1 | 0.0 | bZIP transcription factor 16 isoform X1 | ||||
TrEMBL | A0A0E0KB31 | 0.0 | A0A0E0KB31_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC03G09580.1 | 0.0 | (Oryza punctata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 1e-54 | basic region/leucine zipper transcription factor 16 |