PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G11210.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 556aa    MW: 60463.8 Da    PI: 4.8308
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G11210.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM50.19e-16101471128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyat.gkrknr.atk..sgyWkatgkd 89 
                      l pGf+F+P+ e+l+ ++L + +++++l ++ v+   d  ++ Pw L  ++ +++e+e yf  +  + + +  ++ +r +t    g W ++ ++
  OPUNC02G11210.1  10 LSPGFKFNPSVEQLLRFFLLPYLQHQRLLVDGVVFVDDPASAPPWALLhRHGRGSEDEAYFIGPVPSGEGHrRQQVSRtVTGggGGKWIKQKTE 103
                      579************************9997777777**********8344455667999999887766542566677444466788*876554 PP

              NAM  90 kevlsk....kgelvgl.kktLvfykgrapkgektdWvmheyrl 128
                      ++ ++k    +ge+ g    +L f+  ++ ++ +t Wvmhe+++
  OPUNC02G11210.1 104 HSGKRKrvvfGGETFGWeEFSLNFHADERCRSGSTGWVMHEFAV 147
                      433333333366666661568****99999999*********75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-273167IPR003441NAC domain
PROSITE profilePS5100522.26110167IPR003441NAC domain
PfamPF023656.4E-1112146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 556 aa     Download sequence    Send to blast
MATAAESQGL SPGFKFNPSV EQLLRFFLLP YLQHQRLLVD GVVFVDDPAS APPWALLHRH  60
GRGSEDEAYF IGPVPSGEGH RRQQVSRTVT GGGGGKWIKQ KTEHSGKRKR VVFGGETFGW  120
EEFSLNFHAD ERCRSGSTGW VMHEFAVVPP PGSRVAATHT ACHIAFTGHG QKRKRVPDGY  180
VFIDVQVQTA AGDVPPPSPM LCSFGEPPHS GASHDEHFSD EQPPPLPPHA NTQEHQRFLA  240
TAEQSNQEQE YFLLEQQNCQ DYYVEAAEQS GQDYFYSEMI NQEQGCNQQY YAYHQQQQHL  300
FHGDPLATSR QFLDQDHEVM FIDLGGGLVV SDNGEHAAAP ATEPPVHDVF LEPLVREPPE  360
NVYVDGAREP AMASACSAGG SPLLQQAMPT PQQFLDQEQT QAPAGFNYGG AVISNNNGDG  420
ENAAAAAAQP PARYYNGPVP TVDSVFLDKM REYLMADAKG LCRTHVEDAP TNGDHATAPA  480
PAAGDPLAAQ HGDAPPDTAE LERVVGHLLR EVEDIIKVAA AGGYGSSSDK PLSNFDKAQN  540
QILAKLMAVF NQVAES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0040010.0AP004001.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1115_D03.
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
GenBankCP0126100.0CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0JYK00.0A0A0E0JYK0_ORYPU; Uncharacterized protein
STRINGOPUNC02G11210.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143261123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.16e-10NAC domain containing protein 53