PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC02G01690.2

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 385aa MW: 42148.3 Da PI: 7.1032

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC02G01690.2	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68.7	9.5e-22	282	344	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elk+++rkq+NRe+ArrsR+RK+ae+eeL ++++L aeN++L+ ele++kke+++l+s++ OPUNC02G01690.2 282 ERELKKQKRKQSNRESARRSRLRKQAECEELSVRADTLRAENSSLRAELERIKKEYEALRSHN 344 89**********************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF16596	9.2E-20	162	264	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.7E-15	280	343	No hit	No description
SMART	SM00338	3.8E-19	282	346	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.4E-20	282	344	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	13.254	284	347	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.63E-10	285	342	No hit	No description
CDD	cd14702	3.84E-22	287	337	No hit	No description
PROSITE pattern	PS00036	0	289	304	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence Send to blast
MGTNDPGTPS KATKASEPEQ SPATTSGTTA PVYPEWPGFQ CFYLLFFNLE RPTRQFHRMG 60 SFRLLLLQVP RLIPTCGELS THWPQAYRYR KHQNVDGFIF QRLAELASLQ HVDYGSIVKS 120 GSGVQCRKLS ILREGVHPFN HYPMPTNGNV ETAGTAPGAS EINGRNEHGR TSGPSANGIT 180 SHSESGSESE SEGSDANSQN DSHSKENDVK EDGSSQNGMS RSALNQSMSM APTQTGVVIG 240 GVAPTTNLNI GMDYWGATGS SPVPAMHGKA PSGSARGEQW DERELKKQKR KQSNRESARR 300 SRLRKQAECE ELSVRADTLR AENSSLRAEL ERIKKEYEAL RSHNASLKEK LQGNSDSIPD 360 MNEQNDTNGS CQKQQDSDAQ PNDAP

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence Send to blast

MGTNDPGTPS KATKASEPEQ SPATTSGTTA PVYPEWPGFQ CFYLLFFNLE RPTRQFHRMG  60
SFRLLLLQVP RLIPTCGELS THWPQAYRYR KHQNVDGFIF QRLAELASLQ HVDYGSIVKS  120
GSGVQCRKLS ILREGVHPFN HYPMPTNGNV ETAGTAPGAS EINGRNEHGR TSGPSANGIT  180
SHSESGSESE SEGSDANSQN DSHSKENDVK EDGSSQNGMS RSALNQSMSM APTQTGVVIG  240
GVAPTTNLNI GMDYWGATGS SPVPAMHGKA PSGSARGEQW DERELKKQKR KQSNRESARR  300
SRLRKQAECE ELSVRADTLR AENSSLRAEL ERIKKEYEAL RSHNASLKEK LQGNSDSIPD  360
MNEQNDTNGS CQKQQDSDAQ PNDAP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	298	304	RRSRLRK
2	298	305	RRSRLRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK111901	0.0	AK111901.1 Oryza sativa Japonica Group cDNA clone:J023076M20, full insert sequence.
GenBank	AK112009	0.0	AK112009.1 Oryza sativa Japonica Group cDNA clone:006-209-B12, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015626323.1	1e-155	transcription factor HBP-1a
Refseq	XP_015626324.1	1e-155	transcription factor HBP-1a
Swissprot	P23922	1e-101	HBP1A_WHEAT; Transcription factor HBP-1a
TrEMBL	A0A0E0JV20	0.0	A0A0E0JV20_ORYPU; Uncharacterized protein
STRING	OPUNC02G01690.2	0.0	(Oryza punctata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	4e-43	basic region/leucine zipper transcription factor 16

Publications ? help Back to Top
Tabata T,Nakayama T,Mikami K,Iwabuchi M HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat. EMBO J., 1991. 10(6): p. 1459-67 [PMID:2026143] Tabata T, et al. A protein that binds to a cis-acting element of wheat histone genes has a leucine zipper motif. Science, 1989. 245(4921): p. 965-7 [PMID:2772648] Mikami K, et al. Developmental and tissue-specific regulation of the gene for the wheat basic/leucine zipper protein HBP-1a(17) in transgenic Arabidopsis plants. Mol. Gen. Genet., 1995. 248(5): p. 573-82 [PMID:7476857] Nakayama T,Okanami M,Meshi T,Iwabuchi M Dissection of the wheat transcription factor HBP-1a(17) reveals a modular structure for the activation domain. Mol. Gen. Genet., 1997. 253(5): p. 553-61 [PMID:9065688] Okanami M,Meshi T,Tamai H,Iwabuchi M HALF-1, a bZIP-type protein, interacting with the wheat transcription factor HBP-1a contains a novel transcriptional activation domain. Genes Cells, 1996. 1(1): p. 87-99 [PMID:9078369]