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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA11G04040.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GRAS |
Protein Properties |
Length: 532aa MW: 58338.1 Da PI: 4.552 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA11G04040.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 179.8 | 2e-55 | 134 | 469 | 2 | 345 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.....aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
+lLl+ Aeav++gd la+ + +rl + + +++++ Rla +f ++L++r+++ ++++y+ p++ + s ++ ++++ +e+sP+
ONIVA11G04040.1 134 SDLLLAGAEAVEAGDSILASVAFSRLDDFlsgipENGAASSFDRLAYHFDQGLRSRMSSASTGCYQ---PEPLP----SGNMLVHQIIQELSPF 220
679***********************998554333334479******************9899984...55554....456778899******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
+kf+h+t+NqaIl+a+ g+ vH++D++i++G+QW +L+ La g +R+T++ + ++ + ++ + L++fA++l++pf++n + ++
ONIVA11G04040.1 221 VKFAHFTTNQAILDAIIGDMDVHVVDLNIGEGIQWSSLMSDLAR--CGGKFFRLTAITTYADCHASTHDTVVRLLSEFADSLELPFQYNSICVH 312
*******************************************7..4668*********887799999999999****************8777 PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.......adhnsesFlerflealeyysalfdsl 271
+ ++l +++ + + +++V++ ++ s+s+ + + +L +vk+l+Pk+vv +e++ ++ +s+sF+e f+eal++++++f+s+
ONIVA11G04040.1 313 NEDEL--HAFFEDCKGSVIVSCDTTSMYYK--SLSTLQ--SLLLVCVKKLQPKLVVTIEEDlvrigrgVSPSSASFVEFFFEALHHFTTVFESM 400
65555..777777799******99777775..554444..69*******************6555443444666******************** PP
GRAS 272 eaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk 345
++ + s + vE ellg++i++ v + g+ r+e + +e l GF + +ls + +qa++l+ ++
ONIVA11G04040.1 401 ASCFIGSSyePCLRLVEMELLGPRIQDFVVKYGSVRVEANA-----SEVL--EGFMACELSACNIAQARMLVGLFN 469
77776666578899*********************999888.....5555..59*****************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0016021 | Cellular Component | integral component of membrane |
Sequence ? help Back to Top |
Protein Sequence Length: 532 aa
Download sequence Send
to blast |
MGPIIPEPHV SVTKSTVHFS PSISISPKQA GAGARLGSPP SPPPARTQPE QRTGRGMPPP 60 PRASVDSALH VDPCSDQQED LDLLDTMVLD SNELHQHDAP DVDVSINCDD RIFGQESVNL 120 AAIQEELLEE DSLSDLLLAG AEAVEAGDSI LASVAFSRLD DFLSGIPENG AASSFDRLAY 180 HFDQGLRSRM SSASTGCYQP EPLPSGNMLV HQIIQELSPF VKFAHFTTNQ AILDAIIGDM 240 DVHVVDLNIG EGIQWSSLMS DLARCGGKFF RLTAITTYAD CHASTHDTVV RLLSEFADSL 300 ELPFQYNSIC VHNEDELHAF FEDCKGSVIV SCDTTSMYYK SLSTLQSLLL VCVKKLQPKL 360 VVTIEEDLVR IGRGVSPSSA SFVEFFFEAL HHFTTVFESM ASCFIGSSYE PCLRLVEMEL 420 LGPRIQDFVV KYGSVRVEAN ASEVLEGFMA CELSACNIAQ ARMLVGLFNR PNKVIWSSLA 480 AGCGSHGIVV LAFYAADKLL EFKPKGIETY IHPAVERAHF HKEDRMWQEY EN
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Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC120534 | 0.0 | AC120534.5 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBa0084A20, complete sequence. |
GenBank | AP014967 | 0.0 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. |
GenBank | CP012619 | 0.0 | CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence. |