PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G09230.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 1158aa    MW: 126098 Da    PI: 5.4737
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G09230.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.47.8e-1277955127
              NAM  55 ek.ewyfFskrdkkya...tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                      e+  +yfFs+ + k+a   ++k ++ra++ g+Wka   + ++++ +g  vg k ++ fy     kg++t+W mhe+ 
  ONIVA10G09230.1   7 ENgYIYFFSTIEFKAAkpkQKKWPRRAAQGGRWKAVLGSSQMVEVGGVPVGRKLSMEFY----VKGVRTNWGMHEFV 79 
                      332559**998776663335778899********88666666666**************....899*********95 PP
2NAM52.71.4e-1678289813127
              NAM  13 elvveyLkkkvegkk..leleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkya...tgkrknratksgyWkatgkdkevlskkgel 99 
                      el+ + L  k+ g +    l+ v+++++i++++P +L  + ++ ee+  +yfFs+ + k+a   ++k ++ra++ g+Wka   + ++++ +g  
  ONIVA10G09230.1 782 ELL-DILDDKLGGAPldRALDAVFHDTRILDFHPAKLYgMYAEDEENgYIYFFSTIEFKAAkpkQKKWPRRAAQGGRWKAVLGSSQMVEVGGVP 874
                      666.66888888888533334569*************83344444443459**998777663335778899********88666666666**** PP

              NAM 100 vglkktLvfykgrapkgektdWvmheyr 127
                      vg k ++ fy     kg++t+W mhe+ 
  ONIVA10G09230.1 875 VGRKLSMEFY----VKGVRTNWGMHEFV 898
                      **********....899*********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.653199IPR003441NAC domain
SuperFamilySSF1019411.57E-14797IPR003441NAC domain
PfamPF023659.7E-51178IPR003441NAC domain
PfamPF030811.7E-22623781IPR004140Exocyst complex protein Exo70
SuperFamilySSF747883.5E-27645781IPR016159Cullin repeat-like-containing domain
PROSITE profilePS5100517.778770918IPR003441NAC domain
PfamPF023654.2E-6782897IPR003441NAC domain
SuperFamilySSF1019413.53E-21787916IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006887Biological Processexocytosis
GO:0000145Cellular Componentexocyst
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1158 aa     Download sequence    Send to blast
MYAEDEENGY IYFFSTIEFK AAKPKQKKWP RRAAQGGRWK AVLGSSQMVE VGGVPVGRKL  60
SMEFYVKGVR TNWGMHEFVR IIGPNIEVAD LAVYRLHKLW TNGEEKPGDL AADVAKSTNQ  120
SGQASAADYY QTYQNAVSQA YAYAPPYVLQ PGWSQGYPYD VAAAPPTAPW PVCWAPPSAP  180
GSYDCCYAST FSRPPPPPPI AASTLDKAPI TSTDHGASTN TSAATPAANN KPPPPPVAAT  240
ATTLGKKGEG KGKAPTTTST DHAGSTNTSA PPAANYQPPP LQGTQHVFAS GVVIGHEDEE  300
GYLVVDEVNT WRNTQQLVLE DDDDDDDGRA AGAGAGCARG DIDPLAVMDG VRRQNPDDTP  360
VPVDIPSCKI SELIPSSSPG SSSSSHPQPP DRTSLPSRVE VDAYESSGTL EQGMTSNSRL  420
TKHQERRSST TWDDATDPLA CEGQWGNLEY RVHGNNSFRK AISPTPFHSL HDMERKLTTY  480
VDDIEKSIVL PGYTQGSISV YLPNKLDRFL VAAENLTRIL RHPLLAERED LHDRVRCLHS  540
TTMSALATEF CHLRIWRSAA GPISNESVRC SNDDCSVSSM VSWSSSSSFT RSSTYGFSND  600
GQPEKILNAD KDNLLTHSGA ETTLVMQMIL KLVIMYRALK DEMPVLLLLF LGQTEHTGSP  660
NAFVELVTQL ISALEFMLVM NSRTLTLQGQ QQLFLLNNVH FMLEQAKKFN DLGLILGQSW  720
LIQRQEQLTQ LITGYMEDSW EPVMSSLFEK KTLVSICSMQ KTWKVSDPLI RQKLREAIIQ  780
KELLDILDDK LGGAPLDRAL DAVFHDTRIL DFHPAKLYGM YAEDEENGYI YFFSTIEFKA  840
AKPKQKKWPR RAAQGGRWKA VLGSSQMVEV GGVPVGRKLS MEFYVKGVRT NWGMHEFVRI  900
IGPNIEVADL AVYRLHKLWT NGEEKPGDLA ADVAKSTNQS GQASAADYYQ TYQNAVSQAY  960
AYAPPYVLQP GWSQGYPYDV AAAPPTAPWP VCWAPPSAPG SYDCCYASTF SRPPPPPPIA  1020
ASTLDKAPIT STDHGASTNT SAATPAANNK PPPPPVAATA TTLGKKGEGK GKAPTTTSTD  1080
HAGSTNTSAP PAANYQPPPL QGTQHVFASG VVIGHEDEEG YLVVDEVNTW RNTQQLVLED  1140
DDDDDDGRAA GAGAVTFI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1099040.0AK109904.1 Oryza sativa Japonica Group cDNA clone:002-149-F12, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015614522.10.0uncharacterized protein LOC4348616
TrEMBLA0A0E0IS170.0A0A0E0IS17_ORYNI; Uncharacterized protein
STRINGONIVA10G09230.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35632367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52890.16e-07NAC domain containing protein 19