 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
ONIVA06G24430.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 319aa MW: 34812.5 Da PI: 5.2545 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ONIVA06G24430.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106 | 2.1e-33 | 47 | 101 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
++rlrWt +LH+rFv+av+qLGG+++AtPk il++m+v+gLt++hvkSHLQkYRl
ONIVA06G24430.1 47 RQRLRWTDDLHDRFVDAVTQLGGPDRATPKGILRIMGVQGLTIYHVKSHLQKYRL 101
58****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MYEPKPFSSI VLAHNDPVSH NQQIERINNN VVSNSGGNSS NSNFAARQRL RWTDDLHDRF 60
VDAVTQLGGP DRATPKGILR IMGVQGLTIY HVKSHLQKYR LAKYIPDPTA DGAKSDKKDL 120
GDLLADIESS SGMEIGEALK LQMEVQRQLQ LRIEAQGRYL QKIIEEQQRL SGVLGESGKL 180
GALGPAPGEP YQDSNKTDPS TPVPTSESPI RDKAESGLFK TISSHDDCRE PLTPDSSCRA 240
GSPLESPPRA SKRIRVSSDI DHRGNNEFPP PLKVPEPSSG SDFRQESSVL LSSSAVHFDS 300
LESLDADENV FTNGSGSDD
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 4e-24 | 47 | 104 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 4e-24 | 47 | 104 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 4e-24 | 47 | 104 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 4e-24 | 47 | 104 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ032625 | 0.0 | FJ032625.1 Oryza nivara clone a0074E19 SEC14-like protein gene, partial cds; ABC transporter-like protein, 26S protease regulatory subunit S10B, C2 domain-containing protein, U5 small nuclear ribonucleoprotein component, charged multivesicular body protein 4b, putative SFT2 protein, fructose-bisphosphate aldolase cytoplasmic isozyme, copine-1, subtilisin-like protease precursor, ZAC, MYB-CC type transfactor, calcium ion binding protein, Monoculm1, Mlo family protein, aspartic proteinase nepenthesin-1 precursor, microtubule-associated protein MAP65-1a, IQ calmodulin-binding motif family protein, and EMB2261 putative genes, complete cds; and unknown genes. |
| GenBank | FJ032626 | 0.0 | FJ032626.1 Oryza rufipogon clone a0138I22 subtilisin-like protease precursor, ZAC, MYB-CC type transfactor, calcium ion binding protein, Mlo family protein, aspartic proteinase nepenthesin-1 precursor, microtubule-associated protein MAP65-1a, IQ calmodulin-binding motif family protein, and EMB2261 putative genes, complete cds; and unknown genes. |
