 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ONIVA04G22800.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
C2H2 |
| Protein Properties |
Length: 405aa MW: 43781.9 Da PI: 10.4144 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ONIVA04G22800.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.9 | 0.00033 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C + F++ L H+++H
ONIVA04G22800.1 71 YTCAFCRREFRSAQALGGHMNVH 93
9********************99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MAPTSSTEEV KHLTLHHLLK RQHRLKPAAV VWRWPTSVVP GGGAGRPPVP DEQLAADDVD 60
GLGGTWPPRS YTCAFCRREF RSAQALGGHM NVHRRDRAKM RGHGLHGAAG QQLGAAEAPA 120
AAAAARTEYA VALYPILNSG AGGAAVRIPG GDVLLSAPVA LAAARRGHDH RCIDLRRERS 180
RSTAPSSDVK QHCHDEHVRV VVRPRCAVLA VHLVDLLAVV AGVGAPPAEQ HEVVEDLGVL 240
VQAHDGEERV EDLDHLVDHL RPLLPLLVVG MVESSMPVMS MNSSSSPAAT NTNQMIMAKF 300
LGFLHQLTGG ADDGSSMVDM LLRTWCDADG GDGGVERRRA STANPGDMLL RRRLQILATT 360
RRRCWQRRRP PPPSRCGKSY RSSQGRRRDS PAHSPGRRSP SRRCG
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AL662981 | 0.0 | AL662981.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence. |
| GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
