PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI09G11450.2
Organism
Oryza meridionalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 524aa    MW: 57916.9 Da    PI: 7.2501
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI09G11450.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.8e-11200243141
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                      e++ k  rr+++NReAAr+sR+RKka+i++Le    + ++Le+e
  OMERI09G11450.2 200 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLESsriRLAQLEQE 243
                      6777999************************9633355555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.6E-9198248No hitNo description
SMARTSM003386.6E-7200300IPR004827Basic-leucine zipper domain
PfamPF001702.7E-8201243IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082202244IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-7204245No hitNo description
PROSITE patternPS000360207222IPR004827Basic-leucine zipper domain
PfamPF141448.5E-28309383IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    Send to blast
MMSGSESQQE REHRQHQQEM NISFGMMMNH GHHHYGQHQQ QHHHHPPPSS SSSSSMHAAA  60
ASFMSSKEAS AGAYDHLGEL DQALFMYLDH GSHAASHQEQ RQTLNIFPSQ PMHVEPSPKG  120
EISLVLSPAA VGTKMARSPD HHHHHQQQAA AAMEELATGS RRQDHHHLQH QPFAAEPAGI  180
NRDVKPVAKK DHRRGVSTGE RDPKTLRRLA QNREAARKSR LRKKAYIQQL ESSRIRLAQL  240
EQELHTARAQ GVFFPGSGGL IGEGGGGKGV LLGGIDGVGG GGGGGGLSSE AAMFDVEYGR  300
WQEEHHRLMY ELRAALQQQL PEGELQVYVE SCLAHHDEVA AIKDGAIRGD VFHLISGVWM  360
SPAERCFLWL GGFRPSEVIK MLVAHVEPLT EQQIVGVYGL QQSALETEEA LTQGLDALYQ  420
SLSDTVVSDA LSCPSNVANY MGQMAVAINK LSTLEGFVRQ AENLRQQTLH RLQQVLTTRQ  480
MARSLLAVSD YFHRLRTLSS LWVTRPRHPP HDHQPPPHSA APHT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1031740.0AK103174.1 Oryza sativa Japonica Group cDNA clone:J033121H05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015612565.10.0transcription factor TGA2 isoform X1
SwissprotQ52MZ21e-166TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0E0ETI20.0A0A0E0ETI2_9ORYZ; Uncharacterized protein
STRINGOMERI09G11290.20.0(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-134bZIP family protein