PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI09G11450.1
Organism
Oryza meridionalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 498aa    MW: 54837.1 Da    PI: 7.7153
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI09G11450.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.6e-11174217141
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                      e++ k  rr+++NReAAr+sR+RKka+i++Le    + ++Le+e
  OMERI09G11450.1 174 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLESsriRLAQLEQE 217
                      6777999************************9633355555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.9E-9172222No hitNo description
SMARTSM003386.6E-7174274IPR004827Basic-leucine zipper domain
PfamPF001702.5E-8175217IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082176218IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.16E-7178219No hitNo description
PROSITE patternPS000360181196IPR004827Basic-leucine zipper domain
PfamPF141447.9E-28283357IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    Send to blast
MATITTDSIS SSTIIIRLRH RLPLPPCMPL PQASFLQRSS KEASAGAYDH LGELDQALFM  60
YLDHGSHAAS HQEQRQTLNI FPSQPMHVEP SPKGEISLVL SPAAVGTKMA RSPDHHHHHQ  120
QQAAAAMEEL ATGSRRQDHH HLQHQPFAAE PAGINRDVKP VAKKDHRRGV STGERDPKTL  180
RRLAQNREAA RKSRLRKKAY IQQLESSRIR LAQLEQELHT ARAQGVFFPG SGGLIGEGGG  240
GKGVLLGGID GVGGGGGGGG LSSEAAMFDV EYGRWQEEHH RLMYELRAAL QQQLPEGELQ  300
VYVESCLAHH DEVAAIKDGA IRGDVFHLIS GVWMSPAERC FLWLGGFRPS EVIKMLVAHV  360
EPLTEQQIVG VYGLQQSALE TEEALTQGLD ALYQSLSDTV VSDALSCPSN VANYMGQMAV  420
AINKLSTLEG FVRQAENLRQ QTLHRLQQVL TTRQMARSLL AVSDYFHRLR TLSSLWVTRP  480
RHPPHDHQPP PHSAAPHT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1031740.0AK103174.1 Oryza sativa Japonica Group cDNA clone:J033121H05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015612565.10.0transcription factor TGA2 isoform X1
SwissprotQ52MZ21e-166TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0E0ETI10.0A0A0E0ETI1_9ORYZ; Uncharacterized protein
STRINGOPUNC09G13200.10.0(Oryza punctata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-134bZIP family protein